CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	OQU78269	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022152_P001	Maize	mitochondrion	95.56	95.56
Os07t0617800-01	Rice	mitochondrion	57.49	94.53
TraesCS2A01G167500.1	Wheat	mitochondrion	89.65	87.23
TraesCS2D01G175200.1	Wheat	golgi	89.65	87.07
TraesCS2B01G193600.1	Wheat	mitochondrion	90.02	86.81
HORVU2Hr1G030820.1	Barley	mitochondrion	88.54	86.0
KXG38638	Sorghum	cytosol	72.46	79.35
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	71.16	79.06
VIT_09s0002g00340.t01	Wine grape	mitochondrion	74.12	76.24
Solyc03g123600.2.1	Tomato	cytosol	67.84	75.83
KRH06285	Soybean	mitochondrion	73.38	74.07
KRH47719	Soybean	endoplasmic reticulum	73.01	73.01
Bra025984.1-P	Field mustard	cytosol, mitochondrion	71.9	72.44
CDY26256	Canola	mitochondrion	71.72	72.25
AT1G17290.1	Thale cress	mitochondrion	72.46	72.19
AT1G72330.3	Thale cress	mitochondrion	73.75	72.15
CDX96776	Canola	mitochondrion	72.27	72.14
Bra016607.1-P	Field mustard	mitochondrion	72.09	71.96
CDX83914	Canola	mitochondrion	71.9	71.9
Solyc06g063090.2.1	Tomato	extracellular	71.9	71.77
CDY48485	Canola	plastid	71.53	71.67
CDX81815	Canola	mitochondrion	72.46	71.4
Bra026675.1-P	Field mustard	mitochondrion	72.27	71.35
CDY21752	Canola	mitochondrion	72.09	71.3
CDX68271	Canola	mitochondrion	15.16	64.06
Solyc03g123610.2.1	Tomato	plastid	69.5	62.05
OQU91865	Sorghum	cytosol	34.38	61.39
KXG35682	Sorghum	cytosol	55.45	60.61
CDY50645	Canola	cytosol	21.63	54.17
KXG34265	Sorghum	cytosol	44.36	50.21
CDX83913	Canola	cytosol, nucleus, peroxisome	11.83	50.0
CDX68272	Canola	nucleus	7.39	36.04
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	17.38	20.3
EES12700	Sorghum	cytosol	16.64	18.33
EER90948	Sorghum	cytosol	16.27	17.71
EER87775	Sorghum	plastid	16.45	16.09

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	EntrezGene:8079194	InterPro:Aminotransferase_I/II	UniProt:C5X2E3
ncoils:Coil	EnsemblPlants:EER99708	ProteinID:EER99708	ProteinID:EER99708.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3002G375800	SUPFAM:SSF53383	unigene:Sbi.3664	UniParc:UPI0001A83E1C	RefSeq:XP_002463187.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73319303..73324333

Molecular Weight (calculated)

58847.3 Da

IEP (calculated)

6.453

GRAVY (calculated)

-0.186

Length

541 amino acids

Sequence
(BLAST)

001: MRRFAADRAR RAVATSLRGA ASRSAAPSPH APAPRHPAAP VGAAAMAAAM ARAMSTAAVG APPVSLNTIN PKVLKCEYAV RGEIVTHAQN LQQELQKNPE
101: SLPFDEILYC NIGNPQSLGQ QPVTYFREVL SLCDHPALLD KSETHALYSS DAIERAWQIL EKIPGRATGA YSHSQGVKGL RDEIAAGIAA RDGFHASGDN
201: IFLTDGASPA VHMMMQLLIS SEKDGILCPI PQYPLYSASI ALHGGSLVPY YLDEETGWGL EVDELKKQLE EARSKGITVR ALVVINPGNP TGQVLAEENQ
301: KKIVEFCKNE GLVLLADEVY QENVYVEDKK FHSFKKIARS LGYTDDDLPL VSFQSVSKGF YGECGKRGGY MEITGFSPEV REQIYKVASV NLCSNVSGQI
401: LASLVMNPPK AGDESFESFM LERDGILSSL ARRAKALEEA FNSLEGITCN KAEGAMYLFP RLHLPQKAIG AAQAAGTAPD AYYAKRLLEA TGIVVVPGSG
501: FGQVPGTWHF RCTILPQEDK IPAIISRFKE FHEKFMDEFR D

Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)

001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN

Arabidopsis Description

ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.