Factsheet for TraesCS4A01G422900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	89.51	96.68
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	95.84	96.01
HORVU7Hr1G012940.1	Barley	cytosol	95.3	87.98
HORVU2Hr1G119710.1	Barley	mitochondrion	15.19	86.6
HORVU7Hr1G053970.1	Barley	mitochondrion	11.93	84.62
Os06t0130400-01	Rice	plasma membrane	81.92	83.58
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	81.92	82.07
EER87775	Sorghum	plastid	81.74	81.74
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	7.41	69.49
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	62.57	68.24
HORVU3Hr1G016440.3	Barley	cytosol	34.9	61.86
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	54.25	59.52
PGSC0003DMT400010000	Potato	plastid	58.59	58.91
Solyc08g079750.2.1	Tomato	plastid	58.23	58.76
VIT_00s1764g00010.t01	Wine grape	cytosol	37.07	58.74
VIT_16s0022g02010.t01	Wine grape	cytosol	56.6	58.18
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	51.18	56.49
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.18	56.37
Solyc03g007070.2.1	Tomato	cytosol	54.07	55.89
AT5G51690.1	Thale cress	golgi, mitochondrion	49.91	55.76
CDY46931	Canola	mitochondrion, plastid	50.27	55.6
Bra022560.1-P	Field mustard	mitochondrion, plastid	50.27	55.6
CDX91604	Canola	mitochondrion, plastid	50.27	55.6
KRH09217	Soybean	plastid	52.98	55.49
KRH38710	Soybean	plastid	52.98	55.39
AT1G62960.1	Thale cress	plastid	53.16	52.78
CDY45965	Canola	cytosol	51.72	52.67
Bra027008.1-P	Field mustard	cytosol	51.54	52.49
CDY45474	Canola	cytosol	49.55	52.39
GSMUA_Achr3P12300_001	Banana	mitochondrion	62.39	50.44
TraesCS3A01G106600.1	Wheat	cytosol, plastid	36.35	44.47
TraesCS4A01G256500.1	Wheat	cytosol	35.99	41.03
TraesCS2A01G396400.1	Wheat	cytosol	32.55	37.04
TraesCS1A01G085600.1	Wheat	cytosol, golgi	17.0	19.5
TraesCS5A01G059300.1	Wheat	cytosol	16.64	18.93
TraesCS2A01G261600.1	Wheat	peroxisome	15.91	18.37
TraesCS5A01G216200.1	Wheat	cytosol	15.19	17.0
TraesCS2A01G167500.1	Wheat	mitochondrion	15.91	15.83
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	31.28	9.97

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795
PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4A01G422900	EnsemblPlants:TraesCS4A01G422900.1	TIGR:cd00609	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:693274790..693278073

Molecular Weight (calculated)

60685.8 Da

IEP (calculated)

9.136

GRAVY (calculated)

-0.224

Length

553 amino acids

Sequence
(BLAST)

001: MSRKGDRADK KPHNPRSPRG VGGDREGGGR QQRRADGGMR IVVPLQGVVQ GRGGLVLGSL IPCALFYFLQ LYIKRNRPPP GSPTPAAPSS ASPAAAAGPL
101: SPIHRSLSRG LLSPRALPAL SARGAVVRAG DDDSLYYAGL RRCADDPYHP ASNPSGVIQL GLAENHLSLD LVREWMEEHA GPAMTPGGGD EERDLTISGL
201: ATYQPYDGIL ALKMALAGFM RQIMHESVSF DPSQMVITSG ATPAMEILSF CIADPGNAFL VPSPYYPGWD RDIKWRTGIE LIPVPCRSTD NFNISITALE
301: IAYNQAKKRG VRVRGVLISN PSNPTGSFVP KQTLHDLLDF ATEKNIHLIS DEVFAGSTFG SGEFVSVAEV VNELEDFDRG RVHIIYGLSK DLSLAGFRVG
401: VIYSYNESIV EAAAKIARFS SVSTPTQRLL VAMLSDQKFI SNYLKVNRER LRKAYNLLVD ALKQVGIECF KSSGGFYCWA DMSKFIRSYS EKGERRLWDR
501: LLEEAKVNVT PGSSCHCIEP GWFRCCFTTL RERDIPVVVE RLRRVTASHK SNR

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.