Factsheet for PGSC0003DMT400010000

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079750.2.1	Tomato	plastid	97.82	98.18
VIT_00s1764g00010.t01	Wine grape	cytosol	43.82	69.05
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	59.82	65.28
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	60.0	65.09
HORVU7Hr1G053970.1	Barley	mitochondrion	9.09	64.1
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	58.55	64.02
HORVU2Hr1G119710.1	Barley	mitochondrion	11.27	63.92
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	58.0	62.3
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	56.55	62.08
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	56.36	61.75
AT1G62960.1	Thale cress	plastid	61.82	61.04
CDY45474	Canola	cytosol	57.27	60.23
CDY45965	Canola	cytosol	59.27	60.04
Bra027008.1-P	Field mustard	cytosol	58.91	59.67
EER87775	Sorghum	plastid	59.45	59.13
TraesCS4A01G422900.1	Wheat	golgi	58.91	58.59
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	58.73	58.51
Os06t0130400-01	Rice	plasma membrane	57.64	58.49
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	58.55	58.33
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	6.18	57.63
HORVU7Hr1G012940.1	Barley	cytosol	58.36	53.59
GSMUA_Achr3P12300_001	Banana	mitochondrion	58.91	47.37
PGSC0003DMT400000771	Potato	cytosol	35.82	45.39
PGSC0003DMT400043903	Potato	cytosol	35.82	44.67
PGSC0003DMT400008605	Potato	cytosol	31.64	41.13
HORVU3Hr1G016440.3	Barley	cytosol	23.27	41.03
PGSC0003DMT400013977	Potato	cytosol	27.82	41.02
PGSC0003DMT400008587	Potato	cytosol	34.36	41.0
PGSC0003DMT400055203	Potato	cytosol	34.91	40.94
PGSC0003DMT400012600	Potato	cytosol	33.45	39.4
PGSC0003DMT400014932	Potato	cytosol	34.55	39.09
PGSC0003DMT400032096	Potato	cytosol	33.64	38.22
PGSC0003DMT400000553	Potato	cytosol	33.45	37.86
PGSC0003DMT400031769	Potato	cytosol	33.27	37.73
PGSC0003DMT400012864	Potato	cytosol	33.09	37.53
PGSC0003DMT400084228	Potato	cytosol	11.82	37.14
PGSC0003DMT400055753	Potato	vacuole	25.64	37.11
PGSC0003DMT400092723	Potato	cytosol	5.27	24.79
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	16.73	18.89
PGSC0003DMT400047918	Potato	cytosol	15.64	17.88
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	2.18	14.12
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	39.64	12.56

Protein Annotations

EntrezGene:102600659	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0ZXA8
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	EnsemblPlantsGene:PGSC0003DMG400003918	PGSC:PGSC0003DMG400003918	EnsemblPlants:PGSC0003DMT400010000	PRINTS:PR00753
ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF11	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000296B237	RefSeq:XP_006363709.1	SEG:seg	:

Description

Acc synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400003918]

Coordinates

chr8:-:53454173..53460111

Molecular Weight (calculated)

60351.1 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.183

Length

550 amino acids

Sequence
(BLAST)

001: MTRSRDRSPT RTTTTTISTG GAGGRDGGGA TTAMRVIVPL QGVVQGRGGL FLGSVIPCAL FYFWQLYLKR NRSSGGDNNG ESTAPARSTS STHLPEVSSG
101: SGLQRVHSRV LLSPKGTTGQ SQVSARANSI ISKQIDSSPY YVGLKRASED PYDESSNPDG VIQLGLAENK LSLDLVQEWL AENVSRWMMT QDSSITGIAT
201: YQPFDGLLEL KVAVGEFMSQ ALERSVSFSP SQMVLTGGAA PALEILSFCL ADPGNAFLVP SPYYPDLDRD VKWRTGVEII PVPCRSADNF NLSIDALDRA
301: FNQAKKRGLK VRGIIISNPS NPVGNIFSRE TLYNLLDFAT EKNIHVISNE ILAGSTYGRE EFVSIAEIID SEDFDRSRVH IVYGLSKDLS LPGFRVGVIY
401: SCNENVLAAA KKLTRFSSIS APTQHLIIQM LSDAKFVQQF IKKNRERLRK MSSLFVSGLK QLGIECTKSS GGFYCWADMS RLIRSYNEKG EIELWDNLLN
501: VAKINATPGS SCHCVEPGWF RLCFSTLSEK DISTVMQRIQ KVLELRKSLS

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.