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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000771
PGSC0003DMT400008587
PGSC0003DMT400008605
PGSC0003DMT400012864
PGSC0003DMT400013977
PGSC0003DMT400014932
PGSC0003DMT400031769
PGSC0003DMT400032096
PGSC0003DMT400043903
PGSC0003DMT400049804
PGSC0003DMT400051035
PGSC0003DMT400055203

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G22810.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400012864 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400014932 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400031769 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400032096 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400000771 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400043903 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT5G65800.1 PGSC0003DMT400049804 AT4G02680.1 15118728
AT5G65800.1 PGSC0003DMT400051035 AT5G58550.1 15118728
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400008587 Potato cytosol 98.11 90.02
Solyc02g063540.1.1 Tomato cytosol 55.32 82.39
PGSC0003DMT400013977 Potato cytosol 72.58 82.31
PGSC0003DMT400055203 Potato cytosol 86.52 78.04
VIT_00s0840g00010.t01 Wine grape cytosol 80.85 72.92
VIT_00s1437g00010.t01 Wine grape cytosol 80.85 72.92
CDY66472 Canola cytosol 68.32 71.71
CDX75675 Canola cytosol 75.89 71.18
Bra011784.1-P Field mustard cytosol 76.6 69.08
CDX69326 Canola cytosol 76.6 69.08
Bra010611.1-P Field mustard cytosol 75.65 68.23
CDY69462 Canola cytosol 75.41 68.02
AT4G37770.1 Thale cress cytosol 75.41 68.02
Bra030199.1-P Field mustard cytosol 74.94 66.88
CDY25639 Canola cytosol 74.47 66.46
GSMUA_Achr1P14280_001 Banana nucleus 71.63 66.3
CDX89520 Canola cytosol 74.23 66.24
GSMUA_Achr3P25830_001 Banana mitochondrion 70.21 66.15
GSMUA_Achr2P08600_001 Banana cytosol 72.34 66.09
KRH28319 Soybean cytosol 73.52 66.03
KRH77167 Soybean cytosol 72.81 65.53
KRH04373 Soybean cytosol 73.29 65.26
AT5G65800.1 Thale cress cytosol 72.1 64.89
AT3G49700.1 Thale cress cytosol 72.1 64.89
KRH58165 Soybean cytosol 73.52 64.79
AT2G22810.1 Thale cress cytosol 72.58 64.77
CDY23035 Canola cytosol 71.16 64.59
CDX81296 Canola cytosol 66.9 64.46
Bra012924.1-P Field mustard cytosol 71.39 64.26
Bra031846.1-P Field mustard cytosol 71.39 64.26
CDY02111 Canola cytosol 71.39 64.26
CDY18674 Canola cytosol 66.67 64.24
Bra024420.1-P Field mustard cytosol 70.92 63.83
Bra017962.1-P Field mustard cytosol 70.92 63.83
CDY08163 Canola cytosol 70.92 63.83
CDY05953 Canola cytosol 70.92 63.83
Bra037829.1-P Field mustard cytosol 66.19 63.78
GSMUA_Achr5P08880_001 Banana cytosol 70.21 63.73
GSMUA_Achr4P01340_001 Banana mitochondrion 68.09 62.34
GSMUA_Achr1P04420_001 Banana cytosol 68.09 62.34
PGSC0003DMT400012600 Potato cytosol 65.72 59.53
Os03t0727600-01 Rice cytosol 66.9 58.11
TraesCS4B01G058200.1 Wheat cytosol 66.19 57.73
TraesCS4A01G256500.1 Wheat cytosol 65.96 57.53
TraesCS4D01G058200.1 Wheat cytosol 65.48 57.11
Zm00001d033862_P001 Maize cytosol 65.25 56.91
EER90948 Sorghum cytosol 64.3 54.73
PGSC0003DMT400043903 Potato cytosol 54.85 52.61
PGSC0003DMT400000771 Potato cytosol 53.66 52.3
PGSC0003DMT400084228 Potato cytosol 21.28 51.43
HORVU4Hr1G009800.5 Barley cytosol, plastid 65.72 48.69
PGSC0003DMT400000553 Potato cytosol 52.96 46.09
PGSC0003DMT400031769 Potato cytosol 51.54 44.95
PGSC0003DMT400032096 Potato cytosol 51.06 44.63
PGSC0003DMT400012864 Potato cytosol 50.83 44.33
PGSC0003DMT400014932 Potato cytosol 50.83 44.24
PGSC0003DMT400055753 Potato vacuole 36.88 41.05
PGSC0003DMT400092723 Potato cytosol 9.93 35.9
PGSC0003DMT400079664 Potato golgi, mitochondrion, plastid 41.13 34.52
PGSC0003DMT400010000 Potato plastid 41.13 31.64
PGSC0003DMT400012549 Potato cytosol, mitochondrion 21.51 18.69
PGSC0003DMT400047918 Potato cytosol 18.44 16.22
PGSC0003DMT400042202 Potato cytosol, mitochondrion, peroxisome, plastid 2.84 14.12
Protein Annotations
MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170InterPro:IPR015421
InterPro:IPR015422UniProt:M0ZUU0InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155EnsemblPlantsGene:PGSC0003DMG400003331PGSC:PGSC0003DMG400003331
EnsemblPlants:PGSC0003DMT400008605PRINTS:PR00753ScanProsite:PS00105PANTHER:PTHR43795PANTHER:PTHR43795:SF10InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI000296AFB4SEG:seg:
Description
1-aminocyclopropane-1-carboxylate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400003331]
Coordinates
chr2:+:22595773..22597306
Molecular Weight (calculated)
47993.5 Da
IEP (calculated)
8.444
GRAVY (calculated)
-0.291
Length
423 amino acids
Sequence
(BLAST)
001: MGLAENQLSF DLLESWLTQN PDAAAFKRNG NSIFRELALF QDYHGLPAFK DALVQFMSEI RGNKVSFDSN KLVLTAGATS ANETLMFCLA DPGDAFLLPT
101: PYYPGFDRDL KWRTGAEIVP IQCTSSNGFR ITESALEEAY KEAERRNLRV KGVLVTNPSN PLGTTLTKKE LQLLLTFVST KQIHLISDEI YSGTVFNSPK
201: FVSVMEVLIE NNYMYTEVWD RVHIVYSLSK DLGLPGFRVG AIYSNDDMVV SAATKMSSFG LISSQTQYLL SALLSDKKFT KKYVSENQKR LKKRHEMLVG
301: GLKQIGIRCL ESNAGLFCWV DMRHLLSSNT FDGEMELWKK IVYEVGLNIS PGSSCHCTEP GWFRACFANM SEDTLNIAIQ RLKAFVDSRD NKDDVQNQKH
401: SNKKKSFSKW VFRLSFNERQ RER
Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Arabidopsis Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.