Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65800.1 | CDY18003 | AT4G02680.1 | 15118728 |
| AT5G65800.1 | CDY66290 | AT4G02680.1 | 15118728 |
| AT5G65800.1 | CDY14376 | AT5G58550.1 | 15118728 |
| AT5G65800.1 | CDY32974 | AT5G58550.1 | 15118728 |
| AT5G65800.1 | CDY66209 | AT5G58550.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037829.1-P | Field mustard | cytosol | 99.54 | 99.54 |
| CDX81296 | Canola | cytosol | 99.54 | 99.54 |
| AT5G65800.1 | Thale cress | cytosol | 97.72 | 91.28 |
| CDY02111 | Canola | cytosol | 91.34 | 85.32 |
| CDY23035 | Canola | cytosol | 89.98 | 84.76 |
| CDY08163 | Canola | cytosol | 90.43 | 84.47 |
| CDY05953 | Canola | cytosol | 89.98 | 84.04 |
| CDY66472 | Canola | cytosol | 67.2 | 73.2 |
| CDX75675 | Canola | cytosol | 74.72 | 72.73 |
| Solyc02g063540.1.1 | Tomato | cytosol | 46.92 | 72.54 |
| CDX69326 | Canola | cytosol | 77.22 | 72.28 |
| CDY69462 | Canola | cytosol | 76.31 | 71.43 |
| VIT_00s1437g00010.t01 | Wine grape | cytosol | 74.49 | 69.72 |
| VIT_00s0840g00010.t01 | Wine grape | cytosol | 74.49 | 69.72 |
| PGSC0003DMT400055203 | Potato | cytosol | 74.26 | 69.51 |
| Solyc02g091990.2.1 | Tomato | cytosol | 74.03 | 69.3 |
| CDY25639 | Canola | cytosol | 74.26 | 68.78 |
| CDX89520 | Canola | cytosol | 73.8 | 68.35 |
| PGSC0003DMT400008587 | Potato | cytosol | 71.3 | 67.9 |
| KRH77167 | Soybean | cytosol | 71.98 | 67.23 |
| KRH28319 | Soybean | cytosol | 71.75 | 66.88 |
| PGSC0003DMT400008605 | Potato | cytosol | 64.24 | 66.67 |
| Solyc03g043890.2.1 | Tomato | cytosol | 71.53 | 66.67 |
| PGSC0003DMT400013977 | Potato | cytosol | 56.04 | 65.95 |
| KRH04373 | Soybean | cytosol | 71.3 | 65.89 |
| GSMUA_Achr2P08600_001 | Banana | cytosol | 69.02 | 65.44 |
| KRH58165 | Soybean | cytosol | 70.61 | 64.58 |
| GSMUA_Achr3P25830_001 | Banana | mitochondrion | 65.6 | 64.14 |
| GSMUA_Achr5P08880_001 | Banana | cytosol | 67.65 | 63.73 |
| GSMUA_Achr1P14280_001 | Banana | nucleus | 65.83 | 63.24 |
| GSMUA_Achr4P01340_001 | Banana | mitochondrion | 65.38 | 62.12 |
| GSMUA_Achr1P04420_001 | Banana | cytosol | 64.01 | 60.82 |
| CDY34015 | Canola | cytosol | 62.87 | 59.48 |
| CDX83146 | Canola | cytosol | 62.41 | 59.05 |
| Zm00001d033862_P001 | Maize | cytosol | 62.87 | 56.91 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 62.41 | 56.49 |
| TraesCS4A01G256500.1 | Wheat | cytosol | 62.41 | 56.49 |
| CDY72652 | Canola | cytosol | 25.74 | 56.22 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 61.96 | 56.08 |
| EER90948 | Sorghum | cytosol | 63.1 | 55.73 |
| Os03t0727600-01 | Rice | cytosol | 61.73 | 55.65 |
| CDX89355 | Canola | cytosol | 53.3 | 52.23 |
| CDY71142 | Canola | cytosol | 53.08 | 52.01 |
| CDY42751 | Canola | cytosol | 53.3 | 51.88 |
| CDX94359 | Canola | cytosol | 52.62 | 51.56 |
| CDX92755 | Canola | cytosol | 47.15 | 49.76 |
| CDY11360 | Canola | cytosol | 51.03 | 47.36 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 61.5 | 47.29 |
| CDY65356 | Canola | cytosol | 50.57 | 46.93 |
| CDY15174 | Canola | cytosol | 52.16 | 46.17 |
| CDX86796 | Canola | cytosol | 50.8 | 45.7 |
| CDX90035 | Canola | cytosol | 46.24 | 45.41 |
| CDY13251 | Canola | cytosol | 50.57 | 45.21 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 17.54 | 40.1 |
| CDY46931 | Canola | mitochondrion, plastid | 39.41 | 34.6 |
| CDX91604 | Canola | mitochondrion, plastid | 39.41 | 34.6 |
| CDY45474 | Canola | cytosol | 35.08 | 29.45 |
| CDY45965 | Canola | cytosol | 35.76 | 28.91 |
| CDX91708 | Canola | peroxisome | 17.54 | 19.11 |
| CDY25780 | Canola | peroxisome | 17.54 | 19.11 |
| CDX68271 | Canola | mitochondrion | 5.24 | 17.97 |
| CDY04729 | Canola | cytosol | 19.13 | 17.57 |
| CDY41452 | Canola | peroxisome | 19.13 | 17.57 |
| CDY44130 | Canola | cytosol | 19.13 | 17.57 |
| CDY66294 | Canola | cytosol | 18.91 | 17.26 |
| CDY61225 | Canola | peroxisome | 18.68 | 17.05 |
| CDX96776 | Canola | mitochondrion | 19.36 | 15.68 |
| CDY26256 | Canola | mitochondrion | 19.13 | 15.64 |
| CDY48485 | Canola | plastid | 19.13 | 15.56 |
| CDY21752 | Canola | mitochondrion | 19.36 | 15.54 |
| CDX83914 | Canola | mitochondrion | 19.13 | 15.53 |
| CDX81815 | Canola | mitochondrion | 19.36 | 15.48 |
| CDY12474 | Canola | peroxisome, plastid | 18.45 | 15.08 |
| CDY50645 | Canola | cytosol | 7.29 | 14.81 |
| CDY03822 | Canola | cytosol | 4.33 | 14.73 |
| CDX68272 | Canola | nucleus | 3.64 | 14.41 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.1 | 14.06 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.64 | 12.21 |
| CDY25781 | Canola | cytosol | 1.59 | 12.07 |
| CDX86161 | Canola | cytosol | 3.42 | 11.36 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:50.4.4 | GO:A0A078FZQ8 | UniProt:A0A078FZQ8 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY18674 | ProteinID:CDY18674 | ProteinID:CDY18674.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00005747001 | InterPro:IPR015421 |
| InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF10 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EF1E0A |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g07210DBnaA09g07210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZQ8]
Coordinates
chrLK032087:+:407778..409379
Molecular Weight (calculated)
49948.8 Da
IEP (calculated)
7.139
GRAVY (calculated)
-0.351
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEMKNPNGM IQMGLAENQL CFDLIESWLA KNQDAASLKR NGQSIFRELA LFQDYYGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQALKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL QDKKLENTEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLRHLLDTN TFEAELDLWK KIVYNVKLNI SPGSSCHCTE PGWFRVCFAN MSEDTLDLAL KRLKTFVEST
401: DCGRMISRKS HERLKSLRKK TVSNWVFRVS WSDRVPDER
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQALKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL QDKKLENTEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLRHLLDTN TFEAELDLWK KIVYNVKLNI SPGSSCHCTE PGWFRVCFAN MSEDTLDLAL KRLKTFVEST
401: DCGRMISRKS HERLKSLRKK TVSNWVFRVS WSDRVPDER
001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEIKNPNGM IQMGLAENQL CFDLIESWLT KNPDAASLKR NGQSIFRELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER
Arabidopsis Description
ACS5ETO2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.