Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72652 | Canola | cytosol | 21.35 | 20.4 |
| CDX81296 | Canola | cytosol | 40.62 | 17.77 |
| CDY18674 | Canola | cytosol | 40.1 | 17.54 |
| CDY66472 | Canola | cytosol | 35.94 | 17.12 |
| CDY23035 | Canola | cytosol | 39.58 | 16.31 |
| CDY02111 | Canola | cytosol | 39.58 | 16.17 |
| CDY08163 | Canola | cytosol | 39.06 | 15.96 |
| CDY05953 | Canola | cytosol | 38.54 | 15.74 |
| CDY69462 | Canola | cytosol | 38.02 | 15.56 |
| CDX75675 | Canola | cytosol | 36.46 | 15.52 |
| CDY25639 | Canola | cytosol | 37.5 | 15.19 |
| CDX89520 | Canola | cytosol | 37.5 | 15.19 |
| CDX69326 | Canola | cytosol | 36.98 | 15.14 |
| CDY34015 | Canola | cytosol | 34.9 | 14.44 |
| CDX83146 | Canola | cytosol | 34.38 | 14.22 |
| CDX92755 | Canola | cytosol | 28.65 | 13.22 |
| CDX89355 | Canola | cytosol | 30.21 | 12.95 |
| CDY71142 | Canola | cytosol | 30.21 | 12.95 |
| CDY42751 | Canola | cytosol | 30.21 | 12.86 |
| CDX94359 | Canola | cytosol | 29.69 | 12.72 |
| CDX86796 | Canola | cytosol | 30.21 | 11.89 |
| CDY13251 | Canola | cytosol | 30.21 | 11.81 |
| CDY15174 | Canola | cytosol | 30.21 | 11.69 |
| CDY11360 | Canola | cytosol | 27.6 | 11.21 |
| CDY65356 | Canola | cytosol | 26.56 | 10.78 |
| CDX90035 | Canola | cytosol | 21.88 | 9.4 |
| CDY46931 | Canola | mitochondrion, plastid | 22.92 | 8.8 |
| CDX91604 | Canola | mitochondrion, plastid | 22.92 | 8.8 |
| CDY25781 | Canola | cytosol | 2.6 | 8.62 |
| CDY45474 | Canola | cytosol | 22.4 | 8.22 |
| CDY45965 | Canola | cytosol | 22.4 | 7.92 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 6.87 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 6.87 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 6.87 |
| CDY66294 | Canola | cytosol | 15.62 | 6.24 |
| CDY41452 | Canola | peroxisome | 15.1 | 6.07 |
| CDY44130 | Canola | cytosol | 15.1 | 6.07 |
| CDY04729 | Canola | cytosol | 15.1 | 6.07 |
| CDY61225 | Canola | peroxisome | 15.1 | 6.03 |
| CDY50645 | Canola | cytosol | 6.77 | 6.02 |
| CDY25780 | Canola | peroxisome | 11.46 | 5.46 |
| CDX91708 | Canola | peroxisome | 11.46 | 5.46 |
| CDY48485 | Canola | plastid | 15.1 | 5.37 |
| CDY21752 | Canola | mitochondrion | 15.1 | 5.3 |
| CDY26256 | Canola | mitochondrion | 14.58 | 5.21 |
| CDX83914 | Canola | mitochondrion | 14.58 | 5.18 |
| CDX96776 | Canola | mitochondrion | 14.58 | 5.17 |
| CDX81815 | Canola | mitochondrion | 14.58 | 5.1 |
| CDY12474 | Canola | peroxisome, plastid | 14.06 | 5.03 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 3.12 | 4.69 |
| CDY03822 | Canola | cytosol | 3.12 | 4.65 |
| CDX68272 | Canola | nucleus | 2.08 | 3.6 |
| CDX68271 | Canola | mitochondrion | 2.08 | 3.12 |
| CDX86161 | Canola | cytosol | 1.04 | 1.52 |
Protein Annotations
| EnsemblPlants:CDY43579 | EnsemblPlantsGene:GSBRNA2T00076882001 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:IPR015421 | InterPro:IPR015422 | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF10 |
| PRINTS:PR00753 | ProteinID:CDY43579 | ProteinID:CDY43579.1 | SEG:seg | UniParc:UPI0004EBF342 | UniProt:A0A078I1V4 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g16760DBnaC02g16760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1V4]
Coordinates
chrLK032561:+:216973..219257
Molecular Weight (calculated)
21562.8 Da
IEP (calculated)
9.878
GRAVY (calculated)
-0.381
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFGTLILKR EVTVIVRITT PLKTNVRRRP QNAIADIQES HGQYEKNPYD EIKNLNGMIQ MGVVENQLCF DLIESWLAKN PDAASFKRNV NNPFRELALF
101: QYYHGMPEFK NHIIKWLSSQ LSSSSLFSLL CSTLTNASAP STPTSVYLGE ISVEVSQPHH HQSRLRRGTS GATAPGPSPL RAQARVSPYI NS
101: QYYHGMPEFK NHIIKWLSSQ LSSSSLFSLL CSTLTNASAP STPTSVYLGE ISVEVSQPHH HQSRLRRGTS GATAPGPSPL RAQARVSPYI NS
001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEIKNPNGM IQMGLAENQL CFDLIESWLT KNPDAASLKR NGQSIFRELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER
Arabidopsis Description
ACS5ETO2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.