Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | CDX81296 | AT5G65800.1 | 15118728 |
| AT5G58550.1 | CDY18674 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66209 | Canola | plastid | 95.99 | 95.68 |
| Bra002638.1-P | Field mustard | plastid | 95.55 | 95.55 |
| CDY14376 | Canola | cytosol | 5.75 | 86.89 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 84.71 | 84.43 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 4.99 | 64.79 |
| Os03t0294700-01 | Rice | cytosol | 34.16 | 58.66 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 58.57 | 58.25 |
| KRH30203 | Soybean | plastid | 58.24 | 57.43 |
| KRH72722 | Soybean | cytosol, plastid | 58.24 | 57.31 |
| KRG98245 | Soybean | plastid | 57.81 | 57.19 |
| Solyc09g055310.2.1 | Tomato | cytosol | 55.86 | 56.59 |
| KRH17084 | Soybean | plastid | 57.92 | 55.92 |
| CDY29045 | Canola | cytosol | 55.53 | 54.76 |
| CDX90635 | Canola | cytosol | 54.99 | 54.52 |
| CDY14472 | Canola | cytosol | 53.04 | 54.33 |
| CDX78038 | Canola | cytosol | 54.01 | 54.19 |
| CDX74897 | Canola | plastid | 53.47 | 54.12 |
| CDX91443 | Canola | cytosol, plastid | 53.69 | 54.1 |
| CDX73693 | Canola | cytosol | 54.45 | 53.23 |
| CDY07743 | Canola | cytosol, plastid | 53.47 | 52.78 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 51.95 | 49.43 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 50.98 | 48.7 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 50.33 | 48.08 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 50.43 | 48.04 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 50.22 | 48.03 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 50.22 | 47.88 |
| Zm00001d028769_P004 | Maize | plastid | 49.89 | 47.52 |
| EER95025 | Sorghum | plastid | 49.78 | 47.52 |
| Zm00001d047721_P001 | Maize | plastid | 49.67 | 47.17 |
| CDY66290 | Canola | cytosol, plastid | 40.89 | 45.31 |
| CDY18003 | Canola | cytosol | 40.56 | 44.95 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | UniProt:A0A078H645 | EnsemblPlants:CDY32974 | ProteinID:CDY32974 |
| ProteinID:CDY32974.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00053190001 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44203 |
| PANTHER:PTHR44203:SF1 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54695 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EF3470 | SEG:seg | : | : |
Description
BnaA10g11800DBnaA10g11800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H645]
Coordinates
chrLK032304:+:1..3476
Molecular Weight (calculated)
105009.0 Da
IEP (calculated)
6.346
GRAVY (calculated)
-0.277
Length
922 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNLKLFERF KSTQIHAFTS SQDSPSTSTN GSSSSPRMNF LRHPKPTSKS FSRSLLPHGF PTTDLLEPPL DSYLKPIDLV ESLSNLYRRI ESSSESETSM
101: LYLEQYTVLR SLGDAKLLRR CLLNARRHAV DVPCKVVLSA WLRFERREHE LVGVESMDCN GFAIECPKSS LSRGCDLNLV NEHCKCCEEE EIKVSRADEF
201: SGLDEESDFS FCVGLEKAKC VRSRIASLSR PFEAMLYGSF VESRASEIDF SENGISVEAM VALNIYSRLK RVDLFRVETV FELLGLATKF CCDDLKSACE
301: SRLASSITDL DKALTFVDYA LEERAELLLS ACLQVFLREL PQSLHSSKVM RLFCSSEAKE GLSFLGSECL FMLYYFLSQV GMEERLATEA MLVLLERTRE
401: FARANWQKAV ALHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKTYSA YKLMNYLISK HKPRGWMYQE RSLYNVGDDE KLKDLATATE
501: LDPTLTFPYK YRAVMKFERK QVKEAFEEVD RLIQFKLTPD CLELRAWLFL AVGDKESCLR DIRAVLTLEP KYVVFGGRMR GDLVEALTAQ CSEVDCWVKL
601: YDRWSAVDDV GSLGVVHQML QNDPSKNFLR FRQSLLLLRL NCQGAAMRCL RMAWNMAASE AERLVYEGWL LYDMSYVDEA LAKAEKAISI QRSFEAFFLK
701: AYVLAEKNLD PDESSCVAQV LEEALKCPSD GLRKGQALNN LGSIYIDCSM LDQAETAYKN ALEIKHTRAH QGLARVYFLK NQRKEACEEM TKLINKAFSK
801: AAAYEKRSEY CEREKAKEDL DMATTLDPLR TYPYRYRAAV LMDDQRETEA VEELSKAIAF RPELQTLHLR AAFHEATGKL SLAAQDCEAA LCLDPNHTET
901: LHLYSRSKDQ ASSIDNTIAG LD
101: LYLEQYTVLR SLGDAKLLRR CLLNARRHAV DVPCKVVLSA WLRFERREHE LVGVESMDCN GFAIECPKSS LSRGCDLNLV NEHCKCCEEE EIKVSRADEF
201: SGLDEESDFS FCVGLEKAKC VRSRIASLSR PFEAMLYGSF VESRASEIDF SENGISVEAM VALNIYSRLK RVDLFRVETV FELLGLATKF CCDDLKSACE
301: SRLASSITDL DKALTFVDYA LEERAELLLS ACLQVFLREL PQSLHSSKVM RLFCSSEAKE GLSFLGSECL FMLYYFLSQV GMEERLATEA MLVLLERTRE
401: FARANWQKAV ALHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKTYSA YKLMNYLISK HKPRGWMYQE RSLYNVGDDE KLKDLATATE
501: LDPTLTFPYK YRAVMKFERK QVKEAFEEVD RLIQFKLTPD CLELRAWLFL AVGDKESCLR DIRAVLTLEP KYVVFGGRMR GDLVEALTAQ CSEVDCWVKL
601: YDRWSAVDDV GSLGVVHQML QNDPSKNFLR FRQSLLLLRL NCQGAAMRCL RMAWNMAASE AERLVYEGWL LYDMSYVDEA LAKAEKAISI QRSFEAFFLK
701: AYVLAEKNLD PDESSCVAQV LEEALKCPSD GLRKGQALNN LGSIYIDCSM LDQAETAYKN ALEIKHTRAH QGLARVYFLK NQRKEACEEM TKLINKAFSK
801: AAAYEKRSEY CEREKAKEDL DMATTLDPLR TYPYRYRAAV LMDDQRETEA VEELSKAIAF RPELQTLHLR AAFHEATGKL SLAAQDCEAA LCLDPNHTET
901: LHLYSRSKDQ ASSIDNTIAG LD
001: MRNLKLFERF KSTQVHAFTT QDSPSTSSNG SPRMMKFLGH PKSKSRSLLP HGFPTTDLLE PPLDSYLKPI DLVESLSNLY RRIESSSESE ASMLYLEQYA
101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF
201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE
301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE
401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL
501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW
601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF
701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS
801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH
901: TETLHLYSRS KDQASSIDNT IFGLD
101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF
201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE
301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE
401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL
501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW
601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF
701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS
801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH
901: TETLHLYSRS KDQASSIDNT IFGLD
Arabidopsis Description
EOL2ETO1-like 2 [Source:TAIR;Acc:AT5G58550]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.