CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04373
KRH28319
KRH58165
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58550.1	KRH04373	AT5G65800.1	15118728
AT5G58550.1	KRH28319	AT5G65800.1	15118728
AT5G58550.1	KRH58165	AT5G65800.1	15118728
AT5G58550.1	KRH77167	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30203	Soybean	plastid	93.35	93.05
KRH72722	Soybean	cytosol, plastid	77.15	76.73
KRH17084	Soybean	plastid	76.18	74.35
Bra022691.1-P	Field mustard	cytosol	4.83	73.77
CDY14376	Canola	cytosol	4.83	73.77
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	5.58	73.24
VIT_06s0004g07020.t01	Wine grape	cytosol	67.81	68.18
Os03t0294700-01	Rice	cytosol	36.16	62.76
Solyc09g055310.2.1	Tomato	cytosol	60.62	62.09
KRH76003	Soybean	cytosol	59.33	57.97
CDY32974	Canola	plastid	57.19	57.81
CDY66209	Canola	plastid	56.87	57.3
AT5G58550.1	Thale cress	cytosol, mitochondrion, plastid	56.76	57.19
KRH65637	Soybean	cytosol	58.91	57.19
Bra002638.1-P	Field mustard	plastid	56.44	57.05
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	56.44	54.28
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	55.58	53.68
TraesCS4B01G192300.1	Wheat	cytosol, plastid	52.9	51.09
TraesCS4D01G193600.2	Wheat	cytosol, plastid	52.68	50.93
HORVU4Hr1G055900.5	Barley	cytosol, plastid	52.68	50.78
TraesCS4A01G111500.1	Wheat	cytosol, plastid	52.47	50.52
Zm00001d028769_P004	Maize	plastid	52.36	50.41
EER95025	Sorghum	plastid	51.93	50.1
Zm00001d047721_P001	Maize	plastid	51.18	49.12
KRH71376	Soybean	cytosol	46.03	48.42
KRH67265	Soybean	cytosol	45.92	48.2
KRH32058	Soybean	cytosol	45.82	48.14
KRG95578	Soybean	cytosol	45.92	45.15

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100790527	MapMan:11.5.1.3	Gene3D:3.30.710.10	EMBL:ACUP02010853	InterPro:BTB/POZ_dom
ncoils:Coil	EnsemblPlantsGene:GLYMA_18G059700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K7MQ77	EnsemblPlants:KRG98245	ProteinID:KRG98245
ProteinID:KRG98245.1	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF1
InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00023D9D0D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:5291638..5296355

Molecular Weight (calculated)

105657.0 Da

IEP (calculated)

7.231

GRAVY (calculated)

-0.283

Length

932 amino acids

Sequence
(BLAST)

001: MRGLKLTERF KSTQVHALSS SSSETNGGNS SKASVAAATK PHNYLKRNKT MLPSWSKTKS RTTNNNSTSS LANLALLRLP STDTIEPSIE PHLKPINLVE
101: TLSELYHRME CCTQSNKALM CAEQYSLLRG LGDQKILRRC LRTACQNAED VLSKVVLSAW LRFERRDDEL VGVCSMDCAG YVVECPKKNL EHGFSPCSVN
201: DHCQCQKEPN QETCTDSVCL PDEESDVLFC VGSEEISCVR CRIAALSDPF NAMLYGGFAE SKTNKIDFSG NGICPKGMRA VEFYSRTKRL DLFCPMTVLE
301: LLSFANRFCC VEMRSACDAH LASIVVNVED ALVLIEYGLE ERATLLVGAC LQVLLRELPN SLYNPKVAKI FCSFEAKERL ANVGCASFLL YYFLSQVAME
401: ESMVSKTTMM LLERMGECAA ERWQKALAFH QLGCVLLERN EYKEAQHCFE AAVEEGHVYS LAGVARTKYK QGQPYSAYKL ISSLIFEYKP AGWMYQERAL
501: YNMGKEKSFD LDVATELDPS LSFPYKYRAL AKVEEKKIKE GIIELDRFIG FKLSPDCLEL RAWLYVALED YDSAMRDIRA LLTIEPNYIT SHGKIKGEYL
601: LQLLNRGVQQ KCQADCWMQL YQQWSCVDDI GSLAIIHQML ENEPGKSVLE FRQSLLLLRL NCQKAAMRSL RLARNHSSSM QERLVYEGWI LYDTGYRKEA
701: LARADISIAK HRSFEAFFLK AYVLADTTLD PESSSYVIQL LKEALKCPSD GLRKGQALNN LGSIYVDCGK LELAKECYKN ALAIRHTRAH QGVARIYHQK
801: NQRKAAYDEM TKLIEKAESN ASAYEKRSEY CDREMAKADL DVVTQLDPLR TYPYRYRAAV MMDEQKETEA VEELTKAIKF KPDLQMLHLR AAFYESMGDL
901: SSALQDCQAA LCLDPNHAGT LDVYRRIQRL NF

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.