CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04373
KRH28319
KRH58165
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58550.1	KRH04373	AT5G65800.1	15118728
AT5G58550.1	KRH28319	AT5G65800.1	15118728
AT5G58550.1	KRH58165	AT5G65800.1	15118728
AT5G58550.1	KRH77167	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72722	Soybean	cytosol, plastid	91.2	92.96
KRG98245	Soybean	plastid	74.35	76.18
KRH30203	Soybean	plastid	74.24	75.83
Bra022691.1-P	Field mustard	cytosol	4.71	73.77
CDY14376	Canola	cytosol	4.71	73.77
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	5.13	69.01
VIT_06s0004g07020.t01	Wine grape	cytosol	64.61	66.56
Solyc09g055310.2.1	Tomato	cytosol	59.58	62.53
Os03t0294700-01	Rice	cytosol	34.03	60.52
KRH76003	Soybean	cytosol	58.22	58.28
CDY32974	Canola	plastid	55.92	57.92
KRH65637	Soybean	cytosol	58.01	57.71
CDY66209	Canola	plastid	55.29	57.08
Bra002638.1-P	Field mustard	plastid	55.08	57.05
AT5G58550.1	Thale cress	cytosol, mitochondrion, plastid	54.87	56.65
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	55.5	54.7
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	54.55	53.99
TraesCS4B01G192300.1	Wheat	cytosol, plastid	51.2	50.67
HORVU4Hr1G055900.5	Barley	cytosol, plastid	51.31	50.67
TraesCS4D01G193600.2	Wheat	cytosol, plastid	50.89	50.41
TraesCS4A01G111500.1	Wheat	cytosol, plastid	50.79	50.1
Zm00001d028769_P004	Maize	plastid	50.79	50.1
EER95025	Sorghum	plastid	50.37	49.79
Zm00001d047721_P001	Maize	plastid	49.84	49.02
KRH67265	Soybean	cytosol	44.61	47.97
KRH71376	Soybean	cytosol	44.08	47.52
KRH32058	Soybean	cytosol	43.46	46.79
KRG95578	Soybean	cytosol	44.61	44.94

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100799963	MapMan:11.5.1.3	Gene3D:3.30.710.10	EMBL:ACUP02009043	ncoils:Coil
EnsemblPlantsGene:GLYMA_14G197100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1MBE7	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:KRH17084	ProteinID:KRH17084	ProteinID:KRH17084.1	PFAM:PF13181
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF1	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233B3FD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:46204341..46208498

Molecular Weight (calculated)

108109.0 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.260

Length

955 amino acids

Sequence
(BLAST)

001: MGMPKLSSFS QQQRVFTEKT RRKMRGLKLV ERFKSIQVHA LNSEATSRRN KATGEARAIT IRSLVSKSKS NTTTTTTTTT TTTNSAIANL VVPLQLPSAD
101: TLEPSIEPYL KPTNLVEALA ELYHRLECCC LQSEKKTSLC VEQFTLLRSL GDQKLLRRCL RTARQNAEDV LSKVVLSAWL RFERREDELE GVSSMDCGGC
201: VLECPKVNLV KGFSPCSIND RCQCPQGTKE ETSNEESVFL CLPDEEKKDV SFCIGSEEID CVKWRIAALS DPFKAMLYGG FAESKMRKID FSKNGISSKG
301: MRAVELYSRA KRLDFFCAMT VLELLSFANS FCCEEMKAAC DAHLASFVGS VDDALILIDY GLEERAPLLV ASCLQVLLRE LPNSLHNSKV MNVFCSSEGM
401: KRLAMVGYDS FLLYYFLSQV AMEEIMVSET TLMLLERLGE CATERWQKAL AFHQLGCVLL ERKQYKEAQH SFEVAAEAGH VYSVAGVART KYKQGQPYSA
501: YKLISSLIFE HKPAGWMYQE RALYNMGREK SFDLDVATEL DPSLSFPYKY RALAKVEEKH IKAGILELDK IIGFKLSPDC LEVRARMFIA LKDYGSAIKD
601: IRALLTLEPN YITSNEKISG KYLVHLLSHV VQQKSQAECW MQLYEQWSSV DDVGSLAIIH QMLENEPGKS LLEFRQSLLL LRLNCQKAAM RSLRMARNHS
701: SSLQERLIYE GWILYDTGYR DEALARVDRS ITIQRSFEAY FLKAYVLADT SMDPESASYV IELLEEALKC PSDGLRKGQA LNNLGSIYVD CGNLDLAEAC
801: YENALAIRHT RAHQGLARVY HQKNQRKAAY DEMTKLIEKA ESNASAYEKR SEYCDREMAK VDLDVATQLD PLKTYPYRYR AAVMMDEQKE SEAVDELTKA
901: INFKPDLQML HLRAAFYEAI GELSSALQDC QAALCLDPNH TDTLDLYQRA RKLSF

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.