CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04373
KRH28319
KRH58165
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02680.1	KRH04373	AT5G65800.1	15118728
AT4G02680.1	KRH28319	AT5G65800.1	15118728
AT4G02680.1	KRH58165	AT5G65800.1	15118728
AT4G02680.1	KRH77167	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67265	Soybean	cytosol	88.71	94.71
KRH71376	Soybean	cytosol	77.95	83.41
KRH32058	Soybean	cytosol	77.43	82.75
VIT_00s0179g00100.t01	Wine grape	cytosol	74.05	79.23
Solyc09g065640.2.1	Tomato	cytosol	68.57	73.36
PGSC0003DMT400049804	Potato	cytosol	68.35	73.14
Bra000868.1-P	Field mustard	cytosol	62.55	71.36
CDY66290	Canola	cytosol, plastid	62.34	71.03
CDY18003	Canola	cytosol	62.24	70.91
AT4G02680.1	Thale cress	cytosol	66.14	70.61
GSMUA_Achr4P21140_001	Banana	cytosol	66.35	70.44
GSMUA_Achr4P28450_001	Banana	cytosol	65.19	69.83
Os11t0585900-01	Rice	cytosol	60.87	67.33
EES08750	Sorghum	cytosol	62.55	66.63
TraesCS2D01G562900.1	Wheat	cytosol	61.5	65.65
TraesCS2B01G592500.1	Wheat	cytosol	61.39	65.54
Os07t0178100-01	Rice	cytosol	61.08	65.35
HORVU2Hr1G119180.1	Barley	cytosol	61.08	65.2
EER95939	Sorghum	cytosol	61.08	65.2
Zm00001d018939_P001	Maize	cytosol	60.65	64.75
TraesCS2A01G591300.1	Wheat	cytosol	60.97	64.29
Zm00001d052974_P002	Maize	cytosol, extracellular, nucleus	60.76	63.51
Zm00001d007522_P023	Maize	cytosol	56.96	59.93
KRH76003	Soybean	cytosol	46.94	46.65
KRH65637	Soybean	cytosol	47.15	46.56
KRG98245	Soybean	plastid	45.15	45.92
KRH72722	Soybean	cytosol, plastid	45.25	45.78
KRH30203	Soybean	plastid	44.51	45.13
KRH17084	Soybean	plastid	44.94	44.61

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100793740	MapMan:11.5.1.3	Gene3D:3.30.710.10	UniProt:A0A0R0EYI5	EMBL:ACUP02012119
ncoils:Coil	EnsemblPlantsGene:GLYMA_19G159400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:KRG95578	ProteinID:KRG95578	ProteinID:KRG95578.1	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF2	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF54695	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0006EDAD62	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:42015346..42025067

Molecular Weight (calculated)

107111.0 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.146

Length

948 amino acids

Sequence
(BLAST)

001: MLCLRGKESE ILSLSPNQKH KKKVKGCGAV VEIRDLFRLL CPMRSFFPAE SCKEAHPNAL NPQSWLHIER GKLPKLSSHP SSASMCCCFL VGLGCGVCFA
101: VICFSESLIK VPQPAILPFF KPVDYVEVLA RIHEELESCP PQERSNLFLL QYQVFRGLGE VKLMRRSLQG AWQRAHTVHE KIIFGAWLKY EKQEEELMAD
201: LLAACGKCAK EFAPVDIAFH LPFDVNASSE GRTTNENRIS QNVTFTIGSE KIVCDRQKIS ELSAPFHAML KGHFSESLSE TIDLSENNIS PSGMKAISDF
301: SLNGSLIEVP PNLLLEILVF ANKYCCERLK DACDRRLASL VSSKEDAVEL MEYALDEHSS VLAASCLQVL LRDLPNCMND NRVVEIFVHA NKQQLEVMVG
401: PGIFALFCFL SEVSMNLNSS SDTTAHFLER LVEFAENGKQ RLLALHQLGC VRLLRKEYDE ARCLFEGAVN AGHMYSVAGL ARLDYIKGDK LLSYGQLSSV
501: ISSVTSLGWM YQERSLYCDG DKRWEDLEKA SNLDPTLIYP YMYRAATLMR TQNAHAALAE INRILGFKLS LECLEIRFFI HLSLEDYKAA LCDVQTILTL
601: RSDYRMFEGR VAASQLCTLV REHVERWTTA DCWARLYDCW SAVDDIGSLS VIYQMLESDA AKGILYFRQS LLLLRLNCPE AAMRSLLLAR QHASSEHERL
701: VYEGWILYDT GHYEEGLQKA EESIDIKRSF EAFFLKAYAL ADSSIDPSCS PTVISLLEDA LKCPSDNLRK GQALNNLGSV YVDCGKLDLA ADCYINALKI
801: RHTRAHHGLA RVHCLKNDKA AAYMEMTELI KKAKNNASAY EKRSEYCDRE QAKADLEMVT RLDPLRAYPY RYRAAVLMDN HKEEEAIAEL SRAIAFKADL
901: HLLHLRAAFH EHKEDVLGAL RDCRAALSVD PNHQEMLELH SRVNRHEP

Best Arabidopsis Sequence Match ( AT3G51770.1 )
(BLAST)

001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.