Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER90948 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02680.1 | EER90948 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018939_P001 | Maize | cytosol | 96.51 | 96.51 |
| Os07t0178100-01 | Rice | cytosol | 91.22 | 91.42 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 75.45 | 75.03 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 73.65 | 73.9 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 70.83 | 70.99 |
| Solyc09g065640.2.1 | Tomato | cytosol | 70.16 | 70.32 |
| PGSC0003DMT400049804 | Potato | cytosol | 69.82 | 69.98 |
| CDY66290 | Canola | cytosol, plastid | 63.74 | 68.03 |
| Bra000868.1-P | Field mustard | cytosol | 63.63 | 67.99 |
| CDY18003 | Canola | cytosol | 63.51 | 67.79 |
| EES08750 | Sorghum | cytosol | 67.57 | 67.42 |
| AT4G02680.1 | Thale cress | cytosol | 66.78 | 66.78 |
| KRH71376 | Soybean | cytosol | 65.43 | 65.58 |
| KRH67265 | Soybean | cytosol | 65.54 | 65.54 |
| KRH32058 | Soybean | cytosol | 64.98 | 65.05 |
| VIT_00s0233g00080.t01 | Wine grape | cytosol | 16.67 | 61.92 |
| KRG95578 | Soybean | cytosol | 65.2 | 61.08 |
| VIT_18s0089g00540.t01 | Wine grape | cytosol | 8.0 | 55.91 |
| EER95025 | Sorghum | plastid | 47.64 | 43.79 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | EntrezGene:8081191 | UniProt:C5XB02 | ncoils:Coil |
| EnsemblPlants:EER95939 | ProteinID:EER95939 | ProteinID:EER95939.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR44203 | PANTHER:PTHR44203:SF4 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | EnsemblPlantsGene:SORBI_3002G051800 | SUPFAM:SSF48452 |
| SUPFAM:SSF54695 | SUPFAM:SSF81901 | unigene:Sbi.9961 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0001A83004 | RefSeq:XP_002459418.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:4920027..4925277
Molecular Weight (calculated)
99781.8 Da
IEP (calculated)
5.493
GRAVY (calculated)
-0.124
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSSFLSESP CDEQHIHGYG FNPQSWLQVE RGKLPKSSYS PSSIESLIKI AEPPVVPLYK PLDYVEVLSR IHEELEQCRR SERPGLYLVQ SQVFRGLGEA
101: KLRQRSLHSA WRCANTVHEK VIFGAWLRYE KRGEEIISDV LASCQKCCRE FGPLDVASEM PVRNFEVIGS WETGSSSQLS AMVTFQIQDG RVTCDRCKIA
201: SLSIPFCSML NGPFTESQLE LVDLSENGIS LEGMRAVAEF SSTCSLGDLP VEILLEILVF ANTFCCDSLK DACDRKLASF VSSRQDAVEL MTLAFEENAP
301: ILAASCLQLL LQELPDCLAD DLVISLFLGA TAQQQLIMVG QASFLLYCLL SEVAMNIDPR TETTVFLSEK LVQLAVTPTQ KQIAFHQLGC VRLLRKEYSE
401: AERGFEVAFS AGHVYSIAGI ARIAGIQGQK ALAYEKLSSV ITSNLPLGWM YLERSLYSEG DRKLADLDKA SELDPTLTYP YMYRAASLMR KKDAKLALEE
501: INRLLGFKLA LECLELRICL YLALEDYKSA ICDIHAILTL SPDYRMLEGR VAASKIGTLL GAHVEQWNTA ECWLQLYERW SSVDDIGSLS VIYQMLESDA
601: AKGVLYFRQS LLLLRLNCPE AAMRSLQLAR HHAATEHERL VYEGWLLYDT GHCEEALQKA EESISIQRSF EAFFLKAYVL ADSGVDPSYS ATVISLLEDA
701: LKCPSDRLRK GQALNNLGGV YVDCGKLDSA ADCYTSALKI RHTRAHQGLA RVHFLRNNRE AAYEEMTKLI EKAKNNASAY EKRSEYCERE QTMTDLQTVT
801: QLDPLRVYPY RYRAAVLMDS HKENDAIAEL SRAISFKADL HLLHLRAAFH EHIGDVPSAL RDCRAALSLD PNHQEMLELQ KRVNSQEP
101: KLRQRSLHSA WRCANTVHEK VIFGAWLRYE KRGEEIISDV LASCQKCCRE FGPLDVASEM PVRNFEVIGS WETGSSSQLS AMVTFQIQDG RVTCDRCKIA
201: SLSIPFCSML NGPFTESQLE LVDLSENGIS LEGMRAVAEF SSTCSLGDLP VEILLEILVF ANTFCCDSLK DACDRKLASF VSSRQDAVEL MTLAFEENAP
301: ILAASCLQLL LQELPDCLAD DLVISLFLGA TAQQQLIMVG QASFLLYCLL SEVAMNIDPR TETTVFLSEK LVQLAVTPTQ KQIAFHQLGC VRLLRKEYSE
401: AERGFEVAFS AGHVYSIAGI ARIAGIQGQK ALAYEKLSSV ITSNLPLGWM YLERSLYSEG DRKLADLDKA SELDPTLTYP YMYRAASLMR KKDAKLALEE
501: INRLLGFKLA LECLELRICL YLALEDYKSA ICDIHAILTL SPDYRMLEGR VAASKIGTLL GAHVEQWNTA ECWLQLYERW SSVDDIGSLS VIYQMLESDA
601: AKGVLYFRQS LLLLRLNCPE AAMRSLQLAR HHAATEHERL VYEGWLLYDT GHCEEALQKA EESISIQRSF EAFFLKAYVL ADSGVDPSYS ATVISLLEDA
701: LKCPSDRLRK GQALNNLGGV YVDCGKLDSA ADCYTSALKI RHTRAHQGLA RVHFLRNNRE AAYEEMTKLI EKAKNNASAY EKRSEYCERE QTMTDLQTVT
801: QLDPLRVYPY RYRAAVLMDS HKENDAIAEL SRAISFKADL HLLHLRAAFH EHIGDVPSAL RDCRAALSLD PNHQEMLELQ KRVNSQEP
001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
Arabidopsis Description
EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.