Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0233g00080.t01 | Wine grape | cytosol | 33.86 | 17.99 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 66.14 | 9.48 |
| PGSC0003DMT400049804 | Potato | cytosol | 64.57 | 9.26 |
| Solyc09g065640.2.1 | Tomato | cytosol | 64.57 | 9.26 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 59.06 | 8.4 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 58.27 | 8.36 |
| Os11t0585900-01 | Rice | cytosol | 55.91 | 8.28 |
| Os07t0178100-01 | Rice | cytosol | 57.48 | 8.24 |
| Zm00001d018939_P001 | Maize | cytosol | 56.69 | 8.11 |
| EES08750 | Sorghum | cytosol | 56.69 | 8.09 |
| EER95939 | Sorghum | cytosol | 55.91 | 8.0 |
| TraesCS2B01G592500.1 | Wheat | cytosol | 55.91 | 8.0 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 55.91 | 8.0 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 55.12 | 7.88 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 55.12 | 7.72 |
| TraesCS2A01G591300.1 | Wheat | cytosol | 52.76 | 7.45 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 42.52 | 5.68 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 39.37 | 5.39 |
| Zm00001d007522_P023 | Maize | cytosol | 22.83 | 3.22 |
Protein Annotations
| ArrayExpress:VIT_18s0089g00540 | EMBL:FN594956 | EnsemblPlants:VIT_18s0089g00540.t01 | EnsemblPlantsGene:VIT_18s0089g00540 | Gene3D:1.25.40.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF2 |
| ProteinID:CBI17014 | ProteinID:CBI17014.3 | SUPFAM:SSF48452 | UniParc:UPI0001BE0D5A | UniProt:D7SMY5 | MapMan:35.1 |
Description
No Description!
Coordinates
chr18:-:28333116..28333499
Molecular Weight (calculated)
14178.2 Da
IEP (calculated)
7.770
GRAVY (calculated)
0.045
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: METYADKRHP ALFVINIMRG EVHAVGGIGK PLSAGPVTWA SLAEGFGQYL VFCWVLIRDK EAIAKLSRAI AFKADLHLLH LRAAFHEHIG DVLGALRDCR
101: AALSVDPDHQ EMLELRSRVN SHYPFHP
101: AALSVDPDHQ EMLELRSRVN SHYPFHP
001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
Arabidopsis Description
EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.