CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04373
KRH28319
KRH58165
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02680.1	KRH04373	AT5G65800.1	15118728
AT4G02680.1	KRH28319	AT5G65800.1	15118728
AT4G02680.1	KRH58165	AT5G65800.1	15118728
AT4G02680.1	KRH77167	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32058	Soybean	cytosol	95.71	95.6
KRH67265	Soybean	cytosol	83.86	83.67
VIT_00s0179g00100.t01	Wine grape	cytosol	79.35	79.35
KRG95578	Soybean	cytosol	83.41	77.95
Solyc09g065640.2.1	Tomato	cytosol	73.93	73.93
PGSC0003DMT400049804	Potato	cytosol	73.7	73.7
GSMUA_Achr4P28450_001	Banana	cytosol	70.88	70.96
GSMUA_Achr4P21140_001	Banana	cytosol	71.44	70.88
Bra000868.1-P	Field mustard	cytosol	65.69	70.04
CDY66290	Canola	cytosol, plastid	65.58	69.83
CDY18003	Canola	cytosol	65.46	69.71
AT4G02680.1	Thale cress	cytosol	69.3	69.14
Os11t0585900-01	Rice	cytosol	65.91	68.14
TraesCS2D01G562900.1	Wheat	cytosol	67.04	66.89
TraesCS2B01G592500.1	Wheat	cytosol	66.93	66.78
EES08750	Sorghum	cytosol	67.04	66.74
HORVU2Hr1G119180.1	Barley	cytosol	66.59	66.44
TraesCS2A01G591300.1	Wheat	cytosol	66.48	65.52
Os07t0178100-01	Rice	cytosol	65.46	65.46
EER95939	Sorghum	cytosol	65.58	65.43
Zm00001d018939_P001	Maize	cytosol	64.79	64.64
Zm00001d052974_P002	Maize	cytosol, extracellular, nucleus	64.56	63.06
Zm00001d007522_P023	Maize	cytosol	60.84	59.82
KRH65637	Soybean	cytosol	51.35	47.4
KRH76003	Soybean	cytosol	50.45	46.86
KRG98245	Soybean	plastid	48.42	46.03
KRH72722	Soybean	cytosol, plastid	48.31	45.68
KRH30203	Soybean	plastid	48.08	45.56
KRH17084	Soybean	plastid	47.52	44.08

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100785039	MapMan:11.5.1.3	Gene3D:3.30.710.10	EMBL:ACUP02000894	InterPro:BTB/POZ_dom
ncoils:Coil	EnsemblPlantsGene:GLYMA_02G144600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K7K8D4	EnsemblPlants:KRH71376	ProteinID:KRH71376
ProteinID:KRH71376.1	ProteinID:KRH71377.1	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203
PANTHER:PTHR44203:SF2	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225	SUPFAM:SSF48452	SUPFAM:SSF54695
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002336CF4	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:14923607..14928755

Molecular Weight (calculated)

100240.0 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.218

Length

886 amino acids

Sequence
(BLAST)

001: MRTFFTAESC KETQPNALNP QSWLQVERGK LPKLSSQSSS ASIESLIKVP QSPILPFFKP VDYVEVLAQI HEELESCPPQ EKSNLFLLQY QVFKGLGDVK
101: LMRRSLRSAW QRANTVHEKI IFGAWLKYEK QEELVAQLLT ACGKCEKEFG PIDVESQIPF DENVRSQDRA SMNGNNASEY VIFKIGDEKI VCDRQKISEL
201: SAPFHAMLKG CFRESLSETI DLSENNLSPS GMRAISYFSS TGSLLDVPPN LLVEILAFAN KYCCERLKQA CDRRLASLVS SREDALELME YAVDQNSAGL
301: AASCLQVLLR DIPNCLSDNQ VVELFIHANK QQLAVMVGPG IFALFCFLSE VSMNLNSSSD TTAHFLERLV DFAENDKQRL LAFHQLGCVR LSRKEYDEAY
401: CLFERALNVG HVYSVAGLAR LDSIKGEKLL SYEKISSVIS SDTPLGWMYQ ERSLYCDGDL RQKDLEKATE LDPTLIYPYM YRTASLMKTG NVQGALAEIN
501: RILGFKLSLE CLELRFFIYL ALEDYKAAVR DVQAILTLCP SYKMFEGRVA ASQLCTLVRE HVEHWTTADC WARLYDCWSA VDDIESLSVI YQMLESDAAK
601: GVLYFRQSLL LLRLNCPEAA MRSLQLAWQH ASSEHERLVY EGWILYDTGH CEEGLQKAEE SISIKRSFEA YFLKAYALAD SSVDSSCSST VISLLEDALR
701: CPSDNLRKGQ ALNNLGSVYV DCGKLDLAED CYIKALKIQH TRAHQGLARV HFLKNDKAAA YKEMTNLIEK ARNNASAYEK RSEYGDRDLT KADLEMVTRL
801: DPLRVYPYRY RAAVLMDNHK EEEAIAELSR AIAFKADLHL LHLRAAFHEH NGDVLGALRD CRAALSVDPN HQKMLELHCR VNSHEP

Best Arabidopsis Sequence Match ( AT3G51770.1 )
(BLAST)

001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.