Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02680.1 | KRH04373 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH28319 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH58165 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | KRH77167 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95578 | Soybean | cytosol | 94.71 | 88.71 |
| KRH71376 | Soybean | cytosol | 83.67 | 83.86 |
| KRH32058 | Soybean | cytosol | 83.22 | 83.31 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 79.17 | 79.35 |
| Solyc09g065640.2.1 | Tomato | cytosol | 73.42 | 73.59 |
| PGSC0003DMT400049804 | Potato | cytosol | 73.09 | 73.25 |
| Bra000868.1-P | Field mustard | cytosol | 67.23 | 71.84 |
| CDY66290 | Canola | cytosol, plastid | 67.0 | 71.51 |
| CDY18003 | Canola | cytosol | 66.89 | 71.39 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 71.28 | 70.88 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 70.61 | 70.85 |
| AT4G02680.1 | Thale cress | cytosol | 70.5 | 70.5 |
| Os11t0585900-01 | Rice | cytosol | 65.2 | 67.56 |
| EES08750 | Sorghum | cytosol | 67.0 | 66.85 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 66.1 | 66.1 |
| TraesCS2B01G592500.1 | Wheat | cytosol | 65.99 | 65.99 |
| Os07t0178100-01 | Rice | cytosol | 65.65 | 65.8 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 65.65 | 65.65 |
| EER95939 | Sorghum | cytosol | 65.54 | 65.54 |
| Zm00001d018939_P001 | Maize | cytosol | 65.09 | 65.09 |
| TraesCS2A01G591300.1 | Wheat | cytosol | 65.54 | 64.74 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 64.53 | 63.18 |
| Zm00001d007522_P023 | Maize | cytosol | 60.81 | 59.93 |
| KRH65637 | Soybean | cytosol | 50.9 | 47.08 |
| KRH76003 | Soybean | cytosol | 50.45 | 46.96 |
| KRG98245 | Soybean | plastid | 48.2 | 45.92 |
| KRH72722 | Soybean | cytosol, plastid | 48.2 | 45.68 |
| KRH30203 | Soybean | plastid | 47.64 | 45.24 |
| KRH17084 | Soybean | plastid | 47.97 | 44.61 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100806268 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | EMBL:ACUP02002048 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_03G157200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JNX6 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | ProteinID:KRH67264.1 | EnsemblPlants:KRH67265 | ProteinID:KRH67265 | ProteinID:KRH67265.1 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF2 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF54695 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000233A4A6 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:37253005..37260891
Molecular Weight (calculated)
100417.0 Da
IEP (calculated)
5.897
GRAVY (calculated)
-0.196
Length
888 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSFFPAESC KEAHPNALNP QSWLQIERGK LPKLSSSSHP SSASIESLIK VPQPAILPFF KPVDYVEVLA QIHEELESCP PQERSNLFLL QYQVFRGLGE
101: VKLMRRSLQG AWQRAHTVHE KIIFGAWLKY EKQEEELIAD LLAACGKCAK EFAPVDIASL LPFDVNAGSE GRTTNENCIS QNVTFTIGSE KIICERQKIS
201: ELSAPFRAML KGHFSESLSE TIDLSENNIS PSGMKAISDF SLNGSLIEVL PNLLLEILVF ANKYCCERLK DACDRRLASL VSSKEDAVEL MEYALDEHST
301: VLAASCLQVL LRDLPNCLND NRVVEIFVHA NKQQLAVMVG PGIFTLFCFL GEVSMNLNSS SDTTAHILER LVEFAENDQQ RLLALHQLGC VRLLRKEYDE
401: ARCLFEGAVN AGHIYSVAGL ARLDYIKGDK LLSYGQLNSV ISSVTPLGWM YQERSLYCDG DKRWEDLEKA SNLDPTLIYP YTYRAASLMR TQNAQAALAE
501: INRILGFKLS PECLEVRFFI HLSLEDYKAA LCDVQTILTL RSDYRMFEGR VAASQLCTLV REHVERWTTA DCWARLYDCW SAVDDIGSLS VIYQMLESDA
601: AKGILYFRQS LLLLRLNCPE AAMRSLQLAR QHASSEHERL VYEGWILYDT GHYEEGLWKA EESINIKRSF EAFFLKAYAL ADSSIDPSCS PTVISLLEDA
701: LKCPSDNLRK GQALNNLGSV YVDCGKLDLA ADCYINALKI RHTRAHHGLA RVHCLKNDKA AAYMEMTELI KKAKNNASAY EKRSEYCDRE QAKEDLEMVT
801: RLDPLRVYPY RYRAAVLMDD HKEEEAIAEL SRAIAFKADL HLLHLRAAFH EHKEDVLGAL RDCRAALSVD PNHQEMLELH SRVNRHEP
101: VKLMRRSLQG AWQRAHTVHE KIIFGAWLKY EKQEEELIAD LLAACGKCAK EFAPVDIASL LPFDVNAGSE GRTTNENCIS QNVTFTIGSE KIICERQKIS
201: ELSAPFRAML KGHFSESLSE TIDLSENNIS PSGMKAISDF SLNGSLIEVL PNLLLEILVF ANKYCCERLK DACDRRLASL VSSKEDAVEL MEYALDEHST
301: VLAASCLQVL LRDLPNCLND NRVVEIFVHA NKQQLAVMVG PGIFTLFCFL GEVSMNLNSS SDTTAHILER LVEFAENDQQ RLLALHQLGC VRLLRKEYDE
401: ARCLFEGAVN AGHIYSVAGL ARLDYIKGDK LLSYGQLNSV ISSVTPLGWM YQERSLYCDG DKRWEDLEKA SNLDPTLIYP YTYRAASLMR TQNAQAALAE
501: INRILGFKLS PECLEVRFFI HLSLEDYKAA LCDVQTILTL RSDYRMFEGR VAASQLCTLV REHVERWTTA DCWARLYDCW SAVDDIGSLS VIYQMLESDA
601: AKGILYFRQS LLLLRLNCPE AAMRSLQLAR QHASSEHERL VYEGWILYDT GHYEEGLWKA EESINIKRSF EAFFLKAYAL ADSSIDPSCS PTVISLLEDA
701: LKCPSDNLRK GQALNNLGSV YVDCGKLDLA ADCYINALKI RHTRAHHGLA RVHCLKNDKA AAYMEMTELI KKAKNNASAY EKRSEYCDRE QAKEDLEMVT
801: RLDPLRVYPY RYRAAVLMDD HKEEEAIAEL SRAIAFKADL HLLHLRAAFH EHKEDVLGAL RDCRAALSVD PNHQEMLELH SRVNRHEP
001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.