CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74897	Canola	plastid	94.43	94.84
CDY14472	Canola	cytosol	80.44	81.78
CDY07743	Canola	cytosol, plastid	83.39	81.69
CDY29045	Canola	cytosol	80.22	78.5
CDX90635	Canola	cytosol	79.23	77.96
CDX78038	Canola	cytosol	77.6	77.26
CDX73693	Canola	cytosol	79.23	76.88
VIT_08s0058g00260.t01	Wine grape	cytosol	72.57	69.82
KRH76003	Soybean	cytosol	71.91	68.97
Os03t0294700-01	Rice	cytosol	40.44	68.9
CDY14376	Canola	cytosol	4.59	68.85
KRH65637	Soybean	cytosol	71.69	68.33
PGSC0003DMT400068499	Potato	cytosol, plastid	67.54	65.81
Solyc10g076450.1.1	Tomato	cytosol	67.98	65.54
PGSC0003DMT400041081	Potato	cytosol	66.78	64.52
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	62.51	59.03
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	61.64	58.45
TraesCS4B01G192300.1	Wheat	cytosol, plastid	57.27	54.3
EER95025	Sorghum	plastid	57.27	54.24
HORVU4Hr1G055900.5	Barley	cytosol, plastid	57.27	54.19
TraesCS4A01G111500.1	Wheat	cytosol, plastid	57.27	54.13
Zm00001d028769_P004	Maize	plastid	57.27	54.13
TraesCS4D01G193600.2	Wheat	cytosol, plastid	56.94	54.05
CDY32974	Canola	plastid	54.1	53.69
Zm00001d047721_P001	Maize	plastid	56.5	53.24
CDY66209	Canola	plastid	53.66	53.08
CDY66290	Canola	cytosol, plastid	44.92	49.4
CDY18003	Canola	cytosol	44.81	49.28

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom	EnsemblPlants:CDX91443	ProteinID:CDX91443
ProteinID:CDX91443.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00152765001
InterPro:IPR000210	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13181	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225
SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EF060F
SEG:seg	:	:	:	:	:

Description

BnaC04g07070D

Coordinates

chrLK031867:+:972255..975899

Molecular Weight (calculated)

103613.0 Da

IEP (calculated)

6.447

GRAVY (calculated)

-0.273

Length

915 amino acids

Sequence
(BLAST)

001: MQPNLFTTMR SLKLIEGCKA TQVYALNNNP SSSPPPSTGL REKVLQHLQD HLRVNSIRSK SSRTHQNAAV SLDSLLPHGL PVSDLLEPHI DPSLKFVDSI
101: EKLAGVHRRI ENSSQLEKSE AFLEQCAIFR GLTDPKLFRR SLRYERREDE LIGTTSMDCC GRNLECPNAS LVSGYHPESV YDRCLCSRVE TNGGDCVSEC
201: STSEVDYDIS FCIGDEEVRC VRYKIASLSR PFKAMLYGGF REMRLSAINF TNNGVSAEGM RAAEAFSRVG KVEMFPINIV LELLTLANRF CCDELKAACD
301: SYLSRLVKDL DGALSLIEYG LEEAAYLLVA ACVQVFLREL PSLMRNPNVV KIFCSVEGRE RLGLVGHGSF VLYLFLSQIA MEDDMKSNTT VMLLECLVEY
401: AVEAWQKQLA CHQLGAVMLE RKEYKDAERW FSSAVEAGHV YSLVGVARSK FKRGHRYSAY KIMNSLISDC SAATGWMHQE RSLYCSGKEK LLDLDMATDL
501: DPTLTFPYKF RAVSLAEESQ FGAAVAELNK IMGFKVSPDC LEMRAWISIA MEDYEGALKD IRALLTLEPN FLMFNKKIHG DHMVELLRPL VQQWNQADCW
601: MQLYDRWSSV DDIGSLAVVH HMLANDPGKS LLRFRQSLLL LRLNCQKAAM RSLRLARNHS KSEHERLVYE GWILYDTGHR EEALAKAEES ISIQRSFEAY
701: FLKAYALADS ALDPESSKYV IQLLEEALRC PSDGLRKGQA LNNLGSVYVD CDKLDLAADC YTNALNIKHT RAHQGLARVY HLKHQRKWAY DEMTKLIEKA
801: RNNASAFEKR SEYCDREMAQ SDLGMATLLD PLRTYPYRYR AAVLMDDHKE TEAIEELSRA LAFKPDLQLL HLRAAFYDSM GKSAEAIRDC EAALSLDPNH
901: TDTIDLYNKT REPQP

Best Arabidopsis Sequence Match ( AT3G51770.1 )
(BLAST)

001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.