CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005123.1-P	Field mustard	plastid	99.12	98.9
CDX91443	Canola	cytosol, plastid	94.84	94.43
CDY07743	Canola	cytosol, plastid	83.21	81.16
CDY14472	Canola	cytosol	79.91	80.89
CDY29045	Canola	cytosol	79.8	77.75
CDX90635	Canola	cytosol	79.14	77.53
CDX78038	Canola	cytosol	77.17	76.5
CDX73693	Canola	cytosol	78.49	75.82
VIT_08s0058g00260.t01	Wine grape	cytosol	72.12	69.09
CDY14376	Canola	cytosol	4.61	68.85
Os03t0294700-01	Rice	cytosol	40.5	68.72
KRH76003	Soybean	cytosol	71.68	68.45
KRH65637	Soybean	cytosol	71.79	68.12
Solyc10g076450.1.1	Tomato	cytosol	67.62	64.91
PGSC0003DMT400068499	Potato	cytosol, plastid	66.85	64.86
PGSC0003DMT400041081	Potato	cytosol	66.52	63.99
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	62.02	58.31
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	61.14	57.72
TraesCS4B01G192300.1	Wheat	cytosol, plastid	56.86	53.68
TraesCS4D01G193600.2	Wheat	cytosol, plastid	56.64	53.53
TraesCS4A01G111500.1	Wheat	cytosol, plastid	56.86	53.51
CDY32974	Canola	plastid	54.12	53.47
EER95025	Sorghum	plastid	56.64	53.42
HORVU4Hr1G055900.5	Barley	cytosol, plastid	56.64	53.36
Zm00001d028769_P004	Maize	plastid	56.53	53.2
CDY66209	Canola	plastid	53.57	52.76
Zm00001d047721_P001	Maize	plastid	55.87	52.42
CDY66290	Canola	cytosol, plastid	44.68	48.92
CDY18003	Canola	cytosol	44.57	48.8

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	EnsemblPlants:CDX74897	ProteinID:CDX74897	ProteinID:CDX74897.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00116896001	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203
PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EEE936	SEG:seg	:	:

Description

BnaA05g06430D

Coordinates

chrLK031802:-:1307514..1311161

Molecular Weight (calculated)

103246.0 Da

IEP (calculated)

6.452

GRAVY (calculated)

-0.277

Length

911 amino acids

Sequence
(BLAST)

001: MQPNLFTTMR SLKLIEGCKA TQVYPSSSPP PPSTGLREKL LHHLQDHFRV NSTRSKPSRT HQNAAVSSDS LLPHGLPVSD LLEPHIDPSL RFVDSIEKLA
101: EVHRRIENCP NHEKSEAFLE QCAIVRGLSD PKLFRRSLRH ERREDELIGT TSMDCCGRNL GCPNMSLVSG YDPESVYNRC LCSRSETNGG DCVSECSTCE
201: VDYDMSFCIG DEEVRCVRCK IASLSRPFKV MLYGGFRETR LSAINFALNG VSVEGMRAAE AFSRIHKVEI FSVNIVLELL TLANRFCCDE LKAACDSHLS
301: RLVKDLDDAL LLIEYGLEEA AYLLVAACVQ VFLRELPSSM RNPNVVKIFC SVEGRERLGL VGHGSFVLYL FLSQIAMEDD MKSNTTVMML ECLVEYAVEA
401: WQKQLACHQL GAVMLERKEY KDAERWFSSA VEAGHVYSLV GVARSKFKRG HRYSAYKIMN SLISDCSAAT GWMHQERSLY CSGKEKLLDL DMATDLDPTL
501: TFPYMFRAVS LSEESQFGAA VAELNKIMGF KVSPDCLEMR AWISIAMEDY EGALKDIRAL LTLEPNFLMF NKKIHGDHMV ELLRPLVQQW NQADCWMQLY
601: DRWSSVDDIG SLAVVHHMLA NDPGKSLLRF RQSLLLLRLN CQKAAMRSLR LARNHSKSEH ERLVYEGWIL YDTGHREEAL AKAEESISIQ RSFEAYFLKA
701: YALADSALDP ESSKYVIQLL EEALRCPSDG LRKGQALNNL GSVYVDCDKL DLAADCYTNA LNIKHTRAHQ GLARVYHLKH QRKWAYDEMT KLIEKARNNA
801: SAFEKRSEYC DREMAQSDLG MATLLDPLRT YPYRYRAAVL MDDHKETEAI EELSKALAFK PDLQLLHLRA AFYDSMGKSA EAIRDCEAAL SLDPNHTDTI
901: DLYNKAREPQ P

Best Arabidopsis Sequence Match ( AT3G51770.1 )
(BLAST)

001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.