CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90635	Canola	cytosol	95.29	95.81
CDX78038	Canola	cytosol	88.24	89.77
CDX73693	Canola	cytosol	90.05	89.29
AT3G51770.2	Thale cress	cytosol	87.27	85.09
CDX91443	Canola	cytosol, plastid	78.5	80.22
CDX74897	Canola	plastid	77.75	79.8
CDY14472	Canola	cytosol	75.94	78.89
CDY07743	Canola	cytosol, plastid	77.97	78.05
VIT_08s0058g00260.t01	Wine grape	cytosol	71.98	70.77
KRH76003	Soybean	cytosol	72.09	70.65
KRH65637	Soybean	cytosol	71.34	69.48
CDY14376	Canola	cytosol	4.49	68.85
Os03t0294700-01	Rice	cytosol	38.93	67.78
PGSC0003DMT400068499	Potato	cytosol, plastid	68.02	67.73
Solyc10g076450.1.1	Tomato	cytosol	68.45	67.44
PGSC0003DMT400041081	Potato	cytosol	66.95	66.1
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	63.1	60.89
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	61.5	59.59
CDY32974	Canola	plastid	54.76	55.53
HORVU4Hr1G055900.5	Barley	cytosol, plastid	57.33	55.43
TraesCS4D01G193600.2	Wheat	cytosol, plastid	57.01	55.29
TraesCS4B01G192300.1	Wheat	cytosol, plastid	57.01	55.23
TraesCS4A01G111500.1	Wheat	cytosol, plastid	56.9	54.96
CDY66209	Canola	plastid	54.33	54.92
Zm00001d028769_P004	Maize	plastid	56.58	54.65
EER95025	Sorghum	plastid	55.94	54.14
Zm00001d047721_P001	Maize	plastid	55.62	53.55
CDY66290	Canola	cytosol, plastid	44.71	50.24
CDY18003	Canola	cytosol	44.49	50.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	UniProt:A0A078GRD0	InterPro:BTB/POZ_dom	EnsemblPlants:CDY29045
ProteinID:CDY29045	ProteinID:CDY29045.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00041783001	InterPro:IPR000210	InterPro:IPR011990	InterPro:IPR019734	PFAM:PF13181	PFscan:PS50005
PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225	SUPFAM:SSF48452
SUPFAM:SSF54695	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EE7DC0	SEG:seg	:

Description

BnaC07g32510DBnaC07g32510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRD0]

Coordinates

chrLK032229:-:307487..311025

Molecular Weight (calculated)

105678.0 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.323

Length

935 amino acids

Sequence
(BLAST)

001: MHHNPFTTMR SLKLAEGCKG TQVYALNPPP PPGGVGDKLL QHLQDHLRVN SIRSKSSRTY HHQSTSSLLP YGLPATDLLE PQIDPSLKFP DLVEKMAEVY
101: RRIDASTNLE RSRAFLEQCA VFRGLSDPKL FRRSLRSSRQ HAVDVHAKVV LSSWLRFERR EDELIGTCSM DCCGRILECP KASLLPGYDP ETVYDPCLCS
201: GSGGGSNGVV VNECSTSDEA FEYDMSFCIG DEEVRCVRYK IASLSRPFKA MLYGGFRESK LGTISFTQNG ISVEGMRAAE VFSRTKRLDE FPPHVVLELL
301: KLANRFCCDE LKSSCDSHLA RLVSTLDEAM LLIEYGLEES AYLLVAACLQ VFLRELPSSM HNPNVIKIFC SVEGRERLAS LGHASFALYF FLSQIAMEDD
401: TKSNTTVMIL ERLVECAVES WEKQLAYHQL GVVMLERKEY KDAQRAFNTA VEAGHLYSLV GVARSKFKRD HRYSAYKIIN SLISDHKAAT GWMHQERSLY
501: CSGKEKLLDL DTATELDPTL TFPYKFRAVA LVEENQFNAA ISELNKVLGF KASPDCLEMR AWVSIGKEDY EGALKDIRAL LTLEPNFMMF NGKIHGDHMV
601: ELLRPLAHQR SQADCWMQLF DHWSSVDDIG SLAVVHDMLA HDPGNSLLRF RQSLLLLRLN CQKAAMRSLR LARNHSKLKH ERLVYEGWIL YDTGHREEAL
701: AKAEESISIQ RSFEVFFLKA YALADSTLDP KSSEYVIQLL EEALRCPSDA LRKGQALNNL GSVYVDCDKL DLAADCYTNA LNIKHTRAHQ GLARVYHQKN
801: QRKAAYDEMT KLIEKAQNNA SAYEKRSEYC DREMAQSDLS LATELDPLRT YPYRYRAAVL MDDHKENEAI EELSKAISFK PDLQLLHLRA AFYDSMGEGA
901: SAIKDCEAAL CIDPGHADTL DLYHKARETN ATDQK

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.