Factsheet for Os05t0196600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0192900-00
Os03t0727600-01
Os05t0196600-00
Os05t0319200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	Os03t0727600-01	AT2G22810.1	14983000
AT4G26200.1	Os01t0192900-00	AT4G26200.1	14983000
AT4G26200.1	Os05t0196600-00	AT4G26200.1	14983000
AT4G26200.1	Os05t0319200-00	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	77.43	70.56
CDY72652	Canola	cytosol	30.75	69.15
KRH41440	Soybean	cytosol	66.37	68.18
KRH60148	Soybean	cytosol	65.04	66.82
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	65.71	66.74
KRH49039	Soybean	cytosol	65.04	65.92
KRH74169	Soybean	cytosol	64.6	65.47
Bra026456.1-P	Field mustard	cytosol	64.38	64.96
AT4G26200.1	Thale cress	cytosol	64.16	64.88
Solyc12g008740.1.1	Tomato	cytosol	62.17	64.75
CDX89355	Canola	cytosol	64.16	64.73
CDX94359	Canola	cytosol	64.16	64.73
CDY71142	Canola	cytosol	64.16	64.73
Solyc07g026900.1.1	Tomato	cytosol	62.83	64.4
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	75.66	64.17
GSMUA_Achr10P...	Banana	cytosol	62.39	64.09
GSMUA_Achr4P30870_001	Banana	cytosol	59.73	63.98
CDY42751	Canola	cytosol	63.72	63.86
Bra019117.1-P	Field mustard	cytosol	63.72	63.86
CDX92755	Canola	cytosol	58.19	63.22
Os03t0727600-01	Rice	cytosol	57.96	53.8
Os04t0578000-01	Rice	cytosol	55.09	51.55
Os06t0130400-01	Rice	plasma membrane	43.58	36.35
PGSC0003DMT400092723	Potato	cytosol	9.29	35.9
Os10t0390600-01	Rice	mitochondrion	19.47	18.07
Os07t0617800-01	Rice	mitochondrion	13.05	17.93
Os09t0433900-01	Rice	cytosol	18.81	17.49
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	18.36	17.11
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	17.92	16.77
Os03t0183600-00	Rice	extracellular	17.48	16.26
Os10t0390701-00	Rice	cytosol	0.44	1.85

Protein Annotations

EntrezGene:107275928	MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	UniProt:A0A0P0WIY3	InterPro:Aminotransferase_I/II
ProteinID:BAS92679.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	EnsemblPlantsGene:Os05g0196600
EnsemblPlants:Os05t0196600-00	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0003939477	RefSeq:XP_015639403.1
SEG:seg	:	:	:	:	:

Description

ACC SYNTHASE 3Similar to 1-aminocyclopropane-1-carboxylic acid synthase. (Os05t0196600-00)

Coordinates

chr5:-:5954551..5956291

Molecular Weight (calculated)

49324.7 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.107

Length

452 amino acids

Sequence
(BLAST)

001: MVGRMLSSPE PTLSTMAMSA AHGEDSPYFA GWRAYDEDPY DPITNPQGVI QMGLAENQVS FDLLEEYMRE HPEASDCGAG VRENALFQDY HGLKSFRKAM
101: ASFMETIRGG KARFDPDRVV LTAGATAANE LLTFILADPG DALLVPTPYY PGFDRDLRWR TGVNIVPVSC DSAAGFQVTA GALRAAYDEA VAAGTRVRGV
201: LITNPSNPLG TTAARGVLEG ILDFVARHDM HLISDEIYSG SVFAAPDLVS VAELVDERRR ARGGAADAED IARRVHVVYS LSKDLGLPGF RVGVVYSYND
301: AVVAAARRMS SFTLVSSQTQ RTLAAMLSDA AFAAAYVRSN RDRLRERHAR AVAGLRRAGV ACLRGANAGL FVWVDMRRLL GDGEATVAGE LRLWRRVVAE
401: AKLNISPGSS CHCREPGWFR VCFANMSLET LDVALHRLGC FIKKWEQEQH EN

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.