Factsheet for GSMUA_Achr9P04970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32280_001	Banana	plastid	70.14	71.69
GSMUA_Achr8P21480_001	Banana	plastid	62.59	65.41
HORVU2Hr1G017310.1	Barley	cytosol	48.56	65.22
Os03t0326500-01	Rice	mitochondrion	24.1	60.91
GSMUA_Achr5P07610_001	Banana	mitochondrion	40.65	59.16
TraesCS4D01G176100.1	Wheat	plastid	58.27	58.7
TraesCS4A01G130400.1	Wheat	plastid	57.91	58.33
HORVU4Hr1G051400.3	Barley	plastid	57.55	57.97
TraesCS4B01G174100.1	Wheat	plastid	57.19	57.61
EER92835	Sorghum	plastid	54.68	57.14
KXG36973	Sorghum	plastid	55.76	55.36
KXG39469	Sorghum	plastid	55.76	54.77
Os07t0684100-01	Rice	plastid	54.32	54.12
Zm00001d047555_P001	Maize	plastid	54.32	53.74
TraesCS2A01G100900.1	Wheat	plastid	52.52	53.48
PGSC0003DMT400060823	Potato	mitochondrion	44.24	53.48
Zm00001d022518_P002	Maize	plastid	52.16	53.31
TraesCS2D01G100500.1	Wheat	plastid	52.16	53.31
Bra031632.1-P	Field mustard	plastid	50.0	53.26
CDX95049	Canola	plastid	51.08	52.99
TraesCS2B01G118100.1	Wheat	plastid	51.8	52.75
CDY06319	Canola	plastid	49.28	52.49
AT1G08570.1	Thale cress	plastid	51.8	52.36
CDY22676	Canola	plastid	50.36	52.04
Bra018614.1-P	Field mustard	plastid	50.36	51.66
KRG94786	Soybean	plastid	55.04	51.52
KRH06734	Soybean	plastid	55.04	51.17
CDX93552	Canola	plastid	50.0	51.1
Zm00001d028992_P001	Maize	plastid	51.44	50.35
Solyc10g080730.1.1	Tomato	plastid	46.4	50.19
VIT_08s0007g07620.t01	Wine grape	plastid	54.32	48.87
PGSC0003DMT400048452	Potato	plastid	52.16	48.17
Solyc12g019740.1.1	Tomato	plastid	51.08	47.49
Bra021838.1-P	Field mustard	plastid	43.53	44.49
CDY37738	Canola	endoplasmic reticulum	42.81	41.18
AT2G33270.1	Thale cress	plastid	40.29	41.03
CDY66710	Canola	plastid	32.37	40.54
GSMUA_Achr10P...	Banana	cytosol	41.37	38.85
GSMUA_Achr1P14420_001	Banana	plastid	28.06	36.28
GSMUA_Achr10P...	Banana	mitochondrion	40.65	32.38
GSMUA_Achr7P13460_001	Banana	mitochondrion	28.78	28.67

Protein Annotations

EnsemblPlants:GSMUA_Achr9P04970_001	EnsemblPlants:GSMUA_Achr9T04970_001	EnsemblPlantsGene:GSMUA_Achr9G04970_001	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	PFAM:PF00085	PFscan:PS51352	SEG:seg
SUPFAM:SSF52833	UniParc:UPI0002967E1F	UniProt:M0TXK6	MapMan:10.5.7	:	:

Description

Thioredoxin-like 1-2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G04970_001]

Coordinates

chr9:+:3230778..3232914

Molecular Weight (calculated)

30759.3 Da

IEP (calculated)

10.139

GRAVY (calculated)

-0.237

Length

278 amino acids

Sequence
(BLAST)

001: MAETLAQRTL LLPGGHLSLP PFCGMRSRPS LAAFTLFSRT KVEPLRSSSC DSKFHGRRLV VGARRGRPSR ARLGSGSEQM VLSFKKAIKW WQKGLQPNMV
101: EIESAEHLVD SLLNAGDKLV IVDFFSPGCG GCRALHPKIC QFAESNQNVL FLQINYEQHK SMCYSLGVHV LPFFRFYRGA HGRLCSFSCT NATIKKFKDA
201: LAKHITDRCS LGPARGLEES ELLALAANKD LSFNYTSKPV PVPEEIPERI PTSPKLPLHA VRRPAQESED KALAAAGR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.