CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022518_P002	Maize	plastid	82.86	85.29
HORVU2Hr1G017310.1	Barley	cytosol	56.79	76.81
Os07t0684100-01	Rice	plastid	72.86	73.12
TraesCS2D01G100500.1	Wheat	plastid	67.86	69.85
TraesCS2A01G100900.1	Wheat	plastid	66.43	68.13
TraesCS2B01G118100.1	Wheat	plastid	66.07	67.77
EER92835	Sorghum	plastid	58.57	61.65
KXG39469	Sorghum	plastid	60.71	60.07
PGSC0003DMT400060823	Potato	mitochondrion	46.07	56.09
GSMUA_Achr9P04970_001	Banana	plastid	55.36	55.76
GSMUA_Achr6P32280_001	Banana	plastid	53.57	55.15
GSMUA_Achr8P21480_001	Banana	plastid	51.07	53.76
Bra031632.1-P	Field mustard	plastid	48.93	52.49
CDY06319	Canola	plastid	48.93	52.49
GSMUA_Achr5P07610_001	Banana	mitochondrion	35.0	51.31
CDY22676	Canola	plastid	49.29	51.3
AT1G08570.1	Thale cress	plastid	50.36	51.27
CDX93552	Canola	plastid	49.29	50.74
Solyc10g080730.1.1	Tomato	plastid	46.43	50.58
Bra018614.1-P	Field mustard	plastid	48.57	50.18
CDX95049	Canola	plastid	47.86	50.0
KRH06734	Soybean	plastid	52.86	49.5
KRG94786	Soybean	plastid	52.14	49.16
VIT_08s0007g07620.t01	Wine grape	plastid	51.79	46.93
PGSC0003DMT400048452	Potato	plastid	48.57	45.18
Solyc12g019740.1.1	Tomato	plastid	47.14	44.15
Bra021838.1-P	Field mustard	plastid	40.71	41.91
AT2G33270.1	Thale cress	plastid	39.29	40.29
CDY66710	Canola	plastid	31.43	39.64
CDY37738	Canola	endoplasmic reticulum	40.71	39.45
OQU93158	Sorghum	plastid	26.43	34.91
EES19197	Sorghum	plastid	26.07	32.59

Protein Annotations

EnsemblPlants:KXG36973	EnsemblPlantsGene:SORBI_3002G421600	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR43601	PANTHER:PTHR43601:SF2	PFAM:PF00085	PFscan:PS51352	ProteinID:KXG36973	ProteinID:KXG36973.1
SEG:seg	SUPFAM:SSF52833	UniParc:UPI0001FCCA7C	UniProt:A0A1B6QGE5	MapMan:10.5.7	:

Description

hypothetical protein

Coordinates

chr2:+:76898051..76899913

Molecular Weight (calculated)

29767.6 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.183

Length

280 amino acids

Sequence
(BLAST)

001: MAEALCNGVV ASPYGGGDVG VAGRARGAAK AALAESLPVG GYATKSSFSA GRMSVSDRKP RPLSRNLEAA AAPGQMNLSF PKAMRWWEKG LHPNMREIES
101: AQDLADSLLN AGDKLVVVDF FSPGCGGCRA LHPKIAQFAE KNPDVLFLQV NYETHKSMCY SLHVHVLPFF RFYRGAEGRV SSFSCTNATI KKFKDALAKH
201: GADRCSLGPA RGLDESELMA LAANRDLQFT YQKPGLVPLA EAIAKEAAAP GGPWLPLPAS ATQQLLGHHG SDNSLLSSGR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.