Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95049 | Canola | plastid | 69.82 | 71.64 |
| Bra031632.1-P | Field mustard | plastid | 67.27 | 70.88 |
| CDY22676 | Canola | plastid | 69.09 | 70.63 |
| Bra018614.1-P | Field mustard | plastid | 69.45 | 70.48 |
| CDX93552 | Canola | plastid | 69.45 | 70.22 |
| CDY06319 | Canola | plastid | 64.36 | 67.82 |
| HORVU2Hr1G017310.1 | Barley | cytosol | 48.0 | 63.77 |
| PGSC0003DMT400060823 | Potato | mitochondrion | 49.45 | 59.13 |
| Os03t0326500-01 | Rice | mitochondrion | 22.18 | 55.45 |
| EER92835 | Sorghum | plastid | 53.09 | 54.89 |
| GSMUA_Achr6P32280_001 | Banana | plastid | 53.45 | 54.04 |
| TraesCS4D01G176100.1 | Wheat | plastid | 54.18 | 53.99 |
| HORVU4Hr1G051400.3 | Barley | plastid | 54.18 | 53.99 |
| TraesCS4A01G130400.1 | Wheat | plastid | 54.18 | 53.99 |
| KRG94786 | Soybean | plastid | 58.18 | 53.87 |
| KRH06734 | Soybean | plastid | 58.55 | 53.85 |
| TraesCS4B01G174100.1 | Wheat | plastid | 53.82 | 53.62 |
| Solyc10g080730.1.1 | Tomato | plastid | 49.82 | 53.31 |
| Zm00001d047555_P001 | Maize | plastid | 54.18 | 53.02 |
| Os07t0684100-01 | Rice | plastid | 52.73 | 51.97 |
| KXG39469 | Sorghum | plastid | 53.45 | 51.94 |
| GSMUA_Achr8P21480_001 | Banana | plastid | 50.18 | 51.88 |
| GSMUA_Achr9P04970_001 | Banana | plastid | 52.36 | 51.8 |
| TraesCS2B01G118100.1 | Wheat | plastid | 50.55 | 50.92 |
| TraesCS2A01G100900.1 | Wheat | plastid | 50.55 | 50.92 |
| PGSC0003DMT400048452 | Potato | plastid | 55.27 | 50.5 |
| TraesCS2D01G100500.1 | Wheat | plastid | 49.82 | 50.37 |
| KXG36973 | Sorghum | plastid | 51.27 | 50.36 |
| Solyc12g019740.1.1 | Tomato | plastid | 54.55 | 50.17 |
| VIT_08s0007g07620.t01 | Wine grape | plastid | 56.36 | 50.16 |
| Zm00001d028992_P001 | Maize | plastid | 51.64 | 50.0 |
| GSMUA_Achr5P07610_001 | Banana | mitochondrion | 34.55 | 49.74 |
| Zm00001d022518_P002 | Maize | plastid | 48.0 | 48.53 |
| AT2G33270.1 | Thale cress | plastid | 46.18 | 46.52 |
| AT5G61440.1 | Thale cress | plastid | 38.91 | 43.67 |
| AT4G26160.1 | Thale cress | plastid | 24.36 | 30.32 |
| AT4G29670.2 | Thale cress | plastid | 24.36 | 28.39 |
Protein Annotations
| MapMan:10.5.7 | Gene3D:3.40.30.10 | EntrezGene:837379 | UniProt:A0A178WL40 | ProteinID:AAF99754.1 | Symbol:ACHT4 |
| ProteinID:AEE28307.1 | ProteinID:AEE28309.1 | ProteinID:AEE28310.1 | EMBL:AF144387 | EMBL:AK318661 | ArrayExpress:AT1G08570 |
| EnsemblPlantsGene:AT1G08570 | RefSeq:AT1G08570 | TAIR:AT1G08570 | RefSeq:AT1G08570-TAIR-G | EnsemblPlants:AT1G08570.1 | TAIR:AT1G08570.1 |
| EMBL:AY034938 | EMBL:AY063115 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016671 | GO:GO:0019725 |
| GO:GO:0031969 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | RefSeq:NP_001117248.1 | RefSeq:NP_001117249.1 |
| RefSeq:NP_172333.1 | UniProt:O64654 | ProteinID:OAP19017.1 | PFAM:PF00085 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51352 | PANTHER:PTHR43601 |
| PANTHER:PTHR43601:SF9 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00000A06DC | SEG:seg |
Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
Coordinates
chr1:+:2712694..2714833
Molecular Weight (calculated)
30324.2 Da
IEP (calculated)
8.793
GRAVY (calculated)
-0.318
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.