Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93552 | Canola | plastid | 76.87 | 75.74 |
| CDY22676 | Canola | plastid | 73.51 | 73.23 |
| CDY06319 | Canola | plastid | 69.03 | 70.88 |
| AT1G08570.1 | Thale cress | plastid | 71.64 | 69.82 |
| HORVU2Hr1G017310.1 | Barley | cytosol | 47.76 | 61.84 |
| Os03t0326500-01 | Rice | mitochondrion | 23.13 | 56.36 |
| PGSC0003DMT400060823 | Potato | mitochondrion | 47.39 | 55.22 |
| CDX80647 | Canola | plastid | 27.61 | 54.01 |
| TraesCS4D01G176100.1 | Wheat | plastid | 55.22 | 53.62 |
| TraesCS4A01G130400.1 | Wheat | plastid | 55.22 | 53.62 |
| HORVU4Hr1G051400.3 | Barley | plastid | 54.85 | 53.26 |
| KRG94786 | Soybean | plastid | 58.96 | 53.2 |
| KRH06734 | Soybean | plastid | 59.33 | 53.18 |
| GSMUA_Achr6P32280_001 | Banana | plastid | 53.36 | 52.57 |
| TraesCS4B01G174100.1 | Wheat | plastid | 54.1 | 52.54 |
| GSMUA_Achr8P21480_001 | Banana | plastid | 51.87 | 52.26 |
| EER92835 | Sorghum | plastid | 51.49 | 51.88 |
| GSMUA_Achr9P04970_001 | Banana | plastid | 52.99 | 51.08 |
| Zm00001d047555_P001 | Maize | plastid | 52.99 | 50.53 |
| Solyc10g080730.1.1 | Tomato | plastid | 48.13 | 50.19 |
| KXG39469 | Sorghum | plastid | 52.99 | 50.18 |
| PGSC0003DMT400048452 | Potato | plastid | 56.34 | 50.17 |
| Os07t0684100-01 | Rice | plastid | 51.87 | 49.82 |
| VIT_08s0007g07620.t01 | Wine grape | plastid | 57.09 | 49.51 |
| TraesCS2B01G118100.1 | Wheat | plastid | 49.25 | 48.35 |
| TraesCS2A01G100900.1 | Wheat | plastid | 49.25 | 48.35 |
| Zm00001d028992_P001 | Maize | plastid | 51.12 | 48.24 |
| GSMUA_Achr5P07610_001 | Banana | mitochondrion | 34.33 | 48.17 |
| Solyc12g019740.1.1 | Tomato | plastid | 53.73 | 48.16 |
| KXG36973 | Sorghum | plastid | 50.0 | 47.86 |
| TraesCS2D01G100500.1 | Wheat | plastid | 48.51 | 47.79 |
| Zm00001d022518_P002 | Maize | plastid | 46.64 | 45.96 |
| CDY37738 | Canola | endoplasmic reticulum | 45.9 | 42.56 |
| CDY66710 | Canola | plastid | 35.07 | 42.34 |
| CDY02147 | Canola | plastid | 39.18 | 40.08 |
| CDY56937 | Canola | plastid | 38.81 | 39.85 |
| CDY65919 | Canola | endoplasmic reticulum, golgi, plastid | 36.19 | 35.93 |
| CDX89357 | Canola | plastid | 26.49 | 32.87 |
| CDX94364 | Canola | plastid | 25.37 | 31.34 |
| CDX90776 | Canola | plastid | 25.0 | 31.02 |
| CDY43516 | Canola | plastid | 27.24 | 30.17 |
| CDY30208 | Canola | plastid | 26.87 | 30.0 |
| CDY54277 | Canola | plastid | 26.87 | 29.63 |
Protein Annotations
| EnsemblPlants:CDX95049 | EnsemblPlantsGene:GSBRNA2T00100569001 | Gene3D:3.40.30.10 | GO:A0A078E3F6 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF9 | PFAM:PF00085 | PFscan:PS51352 | ProteinID:CDX95049 |
| ProteinID:CDX95049.1 | SEG:seg | SUPFAM:SSF52833 | UniParc:UPI0004EEA6D2 | MapMan:10.5.7 | : |
Description
BnaC05g06220D
Coordinates
chrLK031886:-:881305..882919
Molecular Weight (calculated)
29494.2 Da
IEP (calculated)
8.927
GRAVY (calculated)
-0.297
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVISKTSL FFRGACVNHH HHADDFSVSP VSFGLKKSFS SLKQKPLRSD FSGKQILQTF NRSFRSSSVT AQSTLRIGTA QKWWEKGLQE NMREISSAQE
101: LVDSLADAGD KLVVVDFFSP GCGGCKALHP KMCQLAEQSA DVQFLQVNYE EHKSMCYSLG VHVLPFFRFY RGAQGRVCSF SCTNATIKKF RDALAKHSPD
201: RCSLGPTKGL EEKELVALAA NKELNFSYTP KVVPVEKEAA IPTSNPALPV PHPSMSGSEE KTLVSAGR
101: LVDSLADAGD KLVVVDFFSP GCGGCKALHP KMCQLAEQSA DVQFLQVNYE EHKSMCYSLG VHVLPFFRFY RGAQGRVCSF SCTNATIKKF RDALAKHSPD
201: RCSLGPTKGL EEKELVALAA NKELNFSYTP KVVPVEKEAA IPTSNPALPV PHPSMSGSEE KTLVSAGR
001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
Arabidopsis Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.