Factsheet for TraesCS2A01G100900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G118100.1	Wheat	plastid	95.6	95.6
TraesCS2D01G100500.1	Wheat	plastid	95.24	95.59
HORVU2Hr1G017310.1	Barley	cytosol	71.06	93.72
Os07t0684100-01	Rice	plastid	71.79	70.25
Zm00001d022518_P002	Maize	plastid	66.3	66.54
KXG36973	Sorghum	plastid	68.13	66.43
TraesCS4A01G130400.1	Wheat	plastid	58.24	57.61
PGSC0003DMT400060823	Potato	mitochondrion	47.99	56.96
GSMUA_Achr8P21480_001	Banana	plastid	53.11	54.51
CDY06319	Canola	plastid	50.55	52.87
Bra031632.1-P	Field mustard	plastid	50.55	52.87
GSMUA_Achr9P04970_001	Banana	plastid	53.48	52.52
GSMUA_Achr6P32280_001	Banana	plastid	51.65	51.84
GSMUA_Achr5P07610_001	Banana	mitochondrion	35.53	50.79
CDX93552	Canola	plastid	50.55	50.74
Solyc10g080730.1.1	Tomato	plastid	47.62	50.58
AT1G08570.1	Thale cress	plastid	50.92	50.55
CDY22676	Canola	plastid	49.45	50.19
Bra018614.1-P	Field mustard	plastid	49.45	49.82
CDX95049	Canola	plastid	48.35	49.25
KRG94786	Soybean	plastid	53.11	48.82
KRH06734	Soybean	plastid	52.75	48.16
VIT_08s0007g07620.t01	Wine grape	plastid	54.21	47.9
PGSC0003DMT400048452	Potato	plastid	49.82	45.18
Solyc12g019740.1.1	Tomato	plastid	49.08	44.82
Bra021838.1-P	Field mustard	plastid	42.49	42.65
AT2G33270.1	Thale cress	plastid	40.66	40.66
CDY66710	Canola	plastid	32.23	39.64
CDY37738	Canola	endoplasmic reticulum	41.39	39.1
TraesCS1A01G124400.2	Wheat	plastid	29.3	37.74

Protein Annotations

EnsemblPlants:TraesCS2A01G100900.1	EnsemblPlantsGene:TraesCS2A01G100900	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF2
PFAM:PF00085	PFscan:PS51352	SEG:seg	SUPFAM:SSF52833	TIGR:cd02947	MapMan:10.5.7

Description

No Description!

Coordinates

chr2A:-:53927270..53928505

Molecular Weight (calculated)

28926.8 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.063

Length

273 amino acids

Sequence
(BLAST)

001: MASALCGGGS GSVAAPCGDL GAAAALAESL PMGAGYRAKS SFPAGRVALA DRPLRRGLQV AAAAGQMNGN LTIGKAMRWW EKVTHPNMRE VESAQDLADS
101: LLNAGDKLVV VDFFSPGCGG CRALHPKIAQ FAERNPDVLF LQVNYEKHKS MCYSLHVHVL PFFRFYRGAQ GRVSSFSCTN ATIKKFKDAL AKHSPDRCSL
201: GPARGLEEAE LLALAANRDL EFTYNEKPTL VPIAEAIQME AASIGGPWMP LPAAATQPLT LGSENGSLIP SGR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.