Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060823 | Potato | mitochondrion | 66.93 | 74.78 |
| HORVU2Hr1G017310.1 | Barley | cytosol | 47.08 | 58.45 |
| Os03t0326500-01 | Rice | mitochondrion | 22.57 | 52.73 |
| Solyc12g019740.1.1 | Tomato | plastid | 59.92 | 51.51 |
| CDY06319 | Canola | plastid | 50.97 | 50.19 |
| AT1G08570.1 | Thale cress | plastid | 53.31 | 49.82 |
| GSMUA_Achr8P21480_001 | Banana | plastid | 50.97 | 49.25 |
| TraesCS4D01G176100.1 | Wheat | plastid | 52.53 | 48.91 |
| GSMUA_Achr6P32280_001 | Banana | plastid | 51.75 | 48.9 |
| EER92835 | Sorghum | plastid | 50.58 | 48.87 |
| KRH06734 | Soybean | plastid | 56.81 | 48.83 |
| KRG94786 | Soybean | plastid | 56.42 | 48.82 |
| Bra031632.1-P | Field mustard | plastid | 49.42 | 48.66 |
| VIT_08s0007g07620.t01 | Wine grape | plastid | 58.37 | 48.54 |
| TraesCS4A01G130400.1 | Wheat | plastid | 51.75 | 48.19 |
| TraesCS4B01G174100.1 | Wheat | plastid | 51.75 | 48.19 |
| CDX95049 | Canola | plastid | 50.19 | 48.13 |
| CDY22676 | Canola | plastid | 50.19 | 47.96 |
| HORVU4Hr1G051400.3 | Barley | plastid | 51.36 | 47.83 |
| TraesCS2D01G100500.1 | Wheat | plastid | 50.58 | 47.79 |
| TraesCS2A01G100900.1 | Wheat | plastid | 50.58 | 47.62 |
| Bra018614.1-P | Field mustard | plastid | 50.19 | 47.6 |
| TraesCS2B01G118100.1 | Wheat | plastid | 50.19 | 47.25 |
| CDX93552 | Canola | plastid | 49.81 | 47.06 |
| KXG39469 | Sorghum | plastid | 51.75 | 47.0 |
| Zm00001d022518_P002 | Maize | plastid | 49.42 | 46.69 |
| KXG36973 | Sorghum | plastid | 50.58 | 46.43 |
| GSMUA_Achr9P04970_001 | Banana | plastid | 50.19 | 46.4 |
| Zm00001d047555_P001 | Maize | plastid | 50.58 | 46.26 |
| Os07t0684100-01 | Rice | plastid | 50.19 | 46.24 |
| GSMUA_Achr5P07610_001 | Banana | mitochondrion | 34.24 | 46.07 |
| Bra021838.1-P | Field mustard | plastid | 47.86 | 45.22 |
| Solyc06g069720.2.1 | Tomato | plastid | 35.8 | 45.1 |
| Solyc03g115870.2.1 | Tomato | cytosol, plastid | 42.8 | 45.08 |
| Zm00001d028992_P001 | Maize | plastid | 49.81 | 45.07 |
| AT2G33270.1 | Thale cress | plastid | 47.86 | 45.05 |
| CDY37738 | Canola | endoplasmic reticulum | 50.58 | 44.98 |
| CDY66710 | Canola | plastid | 36.19 | 41.89 |
| Solyc03g121480.2.1 | Tomato | plastid | 26.07 | 33.84 |
Protein Annotations
| EnsemblPlants:Solyc10g080730.1.1 | EnsemblPlantsGene:Solyc10g080730.1 | Gene3D:3.40.30.10 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| PANTHER:PTHR43601 | PANTHER:PTHR43601:SF9 | PFAM:PF00085 | PFscan:PS51352 | SEG:seg | SUPFAM:SSF52833 |
| UniParc:UPI0002769608 | UniProt:K4D2W3 | MapMan:10.5.7 | : | : | : |
Description
No Description!
Coordinates
chr10:-:61939478..61941349
Molecular Weight (calculated)
28424.5 Da
IEP (calculated)
8.934
GRAVY (calculated)
-0.196
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLLNKAVF LPSILNSSGI YHSNQHAICV FPVKFNRRYH KSAVATAQMS IGIKRAPKWW EKGLQPNMKE VTGAQDLVDT LLNGGDKLVV VDFLSPGCGG
101: CKALHPKICQ LAEMNPDVQF LHVNYEEHKS MCYSLNVHVL PFFRFYRGAE GRLCSFSCTN ATIKKFKDAL TKYGADCCSL GPVKGLEEKE LLALAANKDL
201: SFAYTPKTEE PVPLALEEVK VIKTSRQSSS HPNTFSPLPL PLPLASTLHT AKQDSKS
101: CKALHPKICQ LAEMNPDVQF LHVNYEEHKS MCYSLNVHVL PFFRFYRGAE GRLCSFSCTN ATIKKFKDAL TKYGADCCSL GPVKGLEEKE LLALAANKDL
201: SFAYTPKTEE PVPLALEEVK VIKTSRQSSS HPNTFSPLPL PLPLASTLHT AKQDSKS
001: MTEVISKTSL FLGACGNHHR VDDFSFSPIV FGDSQDESFR RSSAITAQTT LRIGTAQKWW EKGLKDNMRE ISSAQELVDS LTNAGDKLVV VDFFSPGCGG
101: CKALHPKICQ FAEMNPDVQF LQVNYEEHKS MCYSLGVHVL PFFRFYRGSQ GRVCSFSCTN ATIKKFRDAL AKHGPDRCSL GPTKGLEEKE LVALAANKEL
201: NFTYTPKPVP VEKEAATPDS NPSLPVPLPS MSSNDEKTLV SAGR
101: CKALHPKICQ FAEMNPDVQF LQVNYEEHKS MCYSLGVHVL PFFRFYRGSQ GRVCSFSCTN ATIKKFRDAL AKHGPDRCSL GPTKGLEEKE LVALAANKEL
201: NFTYTPKPVP VEKEAATPDS NPSLPVPLPS MSSNDEKTLV SAGR
Arabidopsis Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.