CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031632.1-P	Field mustard	plastid	83.52	83.52
CDY22676	Canola	plastid	82.38	79.93
CDX95049	Canola	plastid	70.88	69.03
CDX93552	Canola	plastid	70.11	67.28
AT1G08570.1	Thale cress	plastid	67.82	64.36
HORVU2Hr1G017310.1	Barley	cytosol	49.04	61.84
CDX80647	Canola	plastid	30.27	57.66
Os03t0326500-01	Rice	mitochondrion	23.75	56.36
PGSC0003DMT400060823	Potato	mitochondrion	48.66	55.22
EER92835	Sorghum	plastid	55.94	54.89
HORVU4Hr1G051400.3	Barley	plastid	55.17	52.17
TraesCS4A01G130400.1	Wheat	plastid	55.17	52.17
KXG39469	Sorghum	plastid	56.32	51.94
TraesCS4D01G176100.1	Wheat	plastid	54.79	51.81
KRG94786	Soybean	plastid	58.24	51.18
GSMUA_Achr8P21480_001	Banana	plastid	52.11	51.13
Zm00001d028992_P001	Maize	plastid	55.56	51.06
Solyc10g080730.1.1	Tomato	plastid	50.19	50.97
TraesCS2B01G118100.1	Wheat	plastid	53.26	50.92
Os07t0684100-01	Rice	plastid	54.41	50.9
TraesCS2D01G100500.1	Wheat	plastid	52.87	50.74
GSMUA_Achr6P32280_001	Banana	plastid	52.87	50.74
TraesCS4B01G174100.1	Wheat	plastid	53.64	50.72
TraesCS2A01G100900.1	Wheat	plastid	52.87	50.55
Zm00001d047555_P001	Maize	plastid	54.41	50.53
KRH06734	Soybean	plastid	57.85	50.5
GSMUA_Achr9P04970_001	Banana	plastid	52.49	49.28
KXG36973	Sorghum	plastid	52.49	48.93
PGSC0003DMT400048452	Potato	plastid	56.32	48.84
Solyc12g019740.1.1	Tomato	plastid	55.17	48.16
Zm00001d022518_P002	Maize	plastid	49.43	47.43
GSMUA_Achr5P07610_001	Banana	mitochondrion	34.48	47.12
VIT_08s0007g07620.t01	Wine grape	plastid	54.02	45.63
CDY66710	Canola	plastid	36.78	43.24
CDY37738	Canola	endoplasmic reticulum	47.13	42.56
CDY56937	Canola	plastid	39.85	39.85
CDY02147	Canola	plastid	39.08	38.93
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	34.87	33.7
CDX89357	Canola	plastid	27.2	32.87
CDX90776	Canola	plastid	26.82	32.41
CDX94364	Canola	plastid	26.44	31.8
CDY43516	Canola	plastid	28.74	30.99
CDY54277	Canola	plastid	27.97	30.04
CDY30208	Canola	plastid	26.82	29.17

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:A0A078F0F2	EnsemblPlants:CDY06319	ProteinID:CDY06319	ProteinID:CDY06319.1
ncoils:Coil	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00122248001	InterPro:IPR013766	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF9	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0004EE81B6	SEG:seg

Description

BnaA09g48840D

Coordinates

chrLK031968:+:785938..787593

Molecular Weight (calculated)

28691.2 Da

IEP (calculated)

8.920

GRAVY (calculated)

-0.363

Length

261 amino acids

Sequence
(BLAST)

001: MAEAAISRTN LIFRGACVNQ HKHVDDYSVS SPVSFGLRKS FPSLKVKPFN QFQSSRSSSS ITAQTTLRIG TPQKWWEKGL KENMREISSA QELVDSLTNA
101: GDKLVVVDFF SPGCGGCKAL HPKICQLAEQ NPDVQFLQVN YEEHKSMCYS LGVHVLPFFR FYRGAHGRVC SFSCTNATIK KFRDALAKHS PDRCSLGPTK
201: GLEEKELVAL AANKELNFSY TPRAVPVEEE EAPVPASNPG LPVAHPSMKA NDGKTLVSSG R

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.