CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026460.1-P	Field mustard	plastid	86.11	86.11
CDX90776	Canola	plastid	85.65	85.65
CDX94364	Canola	plastid	78.7	78.34
AT4G26160.1	Thale cress	plastid	64.81	63.35
PGSC0003DMT400006408	Potato	plastid	44.44	49.23
Solyc03g121480.2.1	Tomato	plastid	43.98	47.98
HORVU1Hr1G028680.1	Barley	plastid	45.83	46.05
TraesCS1A01G124400.2	Wheat	plastid	44.91	45.75
Os05t0200100-01	Rice	plastid	44.91	44.91
TraesCS1B01G142600.2	Wheat	plastid	44.44	44.65
VIT_09s0002g02380.t01	Wine grape	plastid	44.44	44.44
TraesCS1D01G129500.2	Wheat	plastid	43.98	44.19
EES19197	Sorghum	plastid	43.98	42.41
Zm00001d037748_P001	Maize	plastid	43.52	42.34
CDY43516	Canola	plastid	46.76	41.74
CDY30208	Canola	plastid	43.98	39.58
CDY54277	Canola	plastid	43.06	38.27
CDX80647	Canola	plastid	24.07	37.96
GSMUA_Achr7P13460_001	Banana	mitochondrion	47.69	36.92
Zm00001d010000_P001	Maize	plastid	25.0	33.54
CDY66710	Canola	plastid	31.48	30.63
CDY06319	Canola	plastid	32.87	27.2
CDX95049	Canola	plastid	32.87	26.49
CDY22676	Canola	plastid	32.87	26.39
CDX93552	Canola	plastid	32.41	25.74
CDY37738	Canola	endoplasmic reticulum	33.8	25.26
CDY56937	Canola	plastid	28.7	23.75
CDY02147	Canola	plastid	27.78	22.9
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	21.76	17.41

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:A0A078DKC7	EnsemblPlants:CDX89357	ProteinID:CDX89357	ProteinID:CDX89357.1
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454
EnsemblPlantsGene:GSBRNA2T00149586001	InterPro:IPR013766	PFAM:PF00085	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF10	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EEDA7E
SEG:seg	:	:	:	:	:

Description

BnaA01g15360D

Coordinates

chrLK031858:-:1093451..1094639

Molecular Weight (calculated)

24087.5 Da

IEP (calculated)

8.587

GRAVY (calculated)

-0.318

Length

216 amino acids

Sequence
(BLAST)

001: MSPPTSFRSL YASSSTRTPV SPPIRIIPLL NSFNRLYGLS FSTSSSLPSS SSNLFFSTRK QSLCIKVQAL TSETEQPKWW EKKAGPNMID ITSTEQFLNA
101: LKDAGDRLVI VDFYGTWCGS CRAMFPKLCK TAEEHPEISF LKVNFDENKS LCKSLNVKVL PYFHLYRGSD GQVDSFSCSL AKFKKLRDAI ERHNVGVSSD
201: HSSSVSEQVE DSTSSL

Best Arabidopsis Sequence Match ( AT4G26160.1 )
(BLAST)

001: MSPTTTSLRS LSFSLYASSN STPISTPIEA RQLLSSCNRF YGLSSSSSSS SLTTSSLIGN LVFSSRNQSL SVKVQALAAE TEQPKWWERK AGPNMIDITS
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E

Arabidopsis Description

ACHT1Thioredoxin-like 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.