Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G129500.2 | Wheat | plastid | 95.35 | 95.35 |
| TraesCS1A01G124400.2 | Wheat | plastid | 84.65 | 85.85 |
| HORVU1Hr1G028680.1 | Barley | plastid | 74.88 | 74.88 |
| Os05t0200100-01 | Rice | plastid | 73.02 | 72.69 |
| EES19197 | Sorghum | plastid | 70.23 | 67.41 |
| Zm00001d037748_P001 | Maize | plastid | 69.3 | 67.12 |
| KRH49061 | Soybean | plastid | 56.74 | 55.71 |
| KRH74152 | Soybean | plastid | 54.88 | 55.66 |
| PGSC0003DMT400006408 | Potato | plastid | 45.12 | 49.74 |
| VIT_09s0002g02380.t01 | Wine grape | plastid | 49.77 | 49.54 |
| Solyc03g121480.2.1 | Tomato | plastid | 45.12 | 48.99 |
| Bra026460.1-P | Field mustard | plastid | 46.05 | 45.83 |
| CDX90776 | Canola | plastid | 45.58 | 45.37 |
| CDX94364 | Canola | plastid | 45.58 | 45.16 |
| AT4G26160.1 | Thale cress | plastid | 46.05 | 44.8 |
| CDX89357 | Canola | plastid | 44.65 | 44.44 |
| GSMUA_Achr7P13460_001 | Banana | mitochondrion | 53.49 | 41.22 |
| TraesCS4B01G174100.1 | Wheat | plastid | 38.14 | 29.71 |
| TraesCS2B01G118100.1 | Wheat | plastid | 36.74 | 28.94 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G142600.2 | EnsemblPlantsGene:TraesCS1B01G142600 | Gene3D:3.40.30.10 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | PANTHER:PTHR43601 |
| PANTHER:PTHR43601:SF10 | PFAM:PF00085 | PFscan:PS51352 | ScanProsite:PS00194 | SEG:seg | SUPFAM:SSF52833 |
| TIGR:cd02947 | MapMan:10.5.7 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:192265679..192273215
Molecular Weight (calculated)
23551.1 Da
IEP (calculated)
8.855
GRAVY (calculated)
-0.270
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEALLHHLP RRFGASTSAS SSPSSHVVLS PAPRADLRVT RLAAAAPPGR PRRLMAHAAV RSETGEQPKW WEKNAGANMI DIHSTQEFLD ALRDAGDRLV
101: IVEFYGTWCG SCRALFPRLC RTATDNPNIV FLKVNFDENK PMCKRLNVKV LPFFQFYRGA DGQLEAFSCS LAKFQKLKDA IAVHNTDRCS IGPPVGVGDV
201: LDSSSSQEKP TEAAS
101: IVEFYGTWCG SCRALFPRLC RTATDNPNIV FLKVNFDENK PMCKRLNVKV LPFFQFYRGA DGQLEAFSCS LAKFQKLKDA IAVHNTDRCS IGPPVGVGDV
201: LDSSSSQEKP TEAAS
001: MAGVVRLTTT SVQAIRVSSS FSSFATALNP LQPCLPPNSN LNSDKRLRLL SSSPSCSSSH YHPSSGLGSH LPLRRPKSQV VRVKVDENVA ETEPPKWWER
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS
Arabidopsis Description
ACHT2Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.