Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90776 | Canola | plastid | 69.68 | 71.3 |
| CDX94364 | Canola | plastid | 66.97 | 68.2 |
| Bra026460.1-P | Field mustard | plastid | 63.35 | 64.81 |
| CDX89357 | Canola | plastid | 63.35 | 64.81 |
| Solyc03g121480.2.1 | Tomato | plastid | 45.25 | 50.51 |
| PGSC0003DMT400006408 | Potato | plastid | 43.44 | 49.23 |
| VIT_09s0002g02380.t01 | Wine grape | plastid | 47.96 | 49.07 |
| Os05t0200100-01 | Rice | plastid | 47.06 | 48.15 |
| TraesCS1D01G129500.2 | Wheat | plastid | 45.25 | 46.51 |
| TraesCS1B01G142600.2 | Wheat | plastid | 44.8 | 46.05 |
| HORVU1Hr1G028680.1 | Barley | plastid | 44.8 | 46.05 |
| TraesCS1A01G124400.2 | Wheat | plastid | 43.89 | 45.75 |
| EES19197 | Sorghum | plastid | 45.7 | 45.09 |
| Zm00001d037748_P001 | Maize | plastid | 44.8 | 44.59 |
| AT4G29670.2 | Thale cress | plastid | 43.44 | 40.68 |
| Zm00001d010000_P001 | Maize | plastid | 27.6 | 37.89 |
| GSMUA_Achr7P13460_001 | Banana | mitochondrion | 45.7 | 36.2 |
| AT2G33270.1 | Thale cress | plastid | 32.13 | 26.01 |
| AT5G61440.1 | Thale cress | plastid | 28.51 | 25.71 |
| AT1G08570.1 | Thale cress | plastid | 30.32 | 24.36 |
Protein Annotations
| MapMan:10.5.7 | Gene3D:3.40.30.10 | EntrezGene:828722 | Symbol:ACHT1 | ProteinID:AEE85165.1 | EMBL:AF144388 |
| ArrayExpress:AT4G26160 | EnsemblPlantsGene:AT4G26160 | RefSeq:AT4G26160 | TAIR:AT4G26160 | RefSeq:AT4G26160-TAIR-G | EnsemblPlants:AT4G26160.1 |
| TAIR:AT4G26160.1 | EMBL:AY085376 | EMBL:BT024608 | ProteinID:CAB39681.1 | ProteinID:CAB79471.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009987 | GO:GO:0010109 | GO:GO:0015979 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0045454 |
| GO:GO:0051776 | GO:GO:0055114 | InterPro:IPR013766 | RefSeq:NP_194346.1 | PFAM:PF00085 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF10 | UniProt:Q8LEK4 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI00000A12DC | SEG:seg | : |
Description
ACHT1Thioredoxin-like 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK4]
Coordinates
chr4:+:13255251..13256879
Molecular Weight (calculated)
24353.7 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.248
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPTTTSLRS LSFSLYASSN STPISTPIEA RQLLSSCNRF YGLSSSSSSS SLTTSSLIGN LVFSSRNQSL SVKVQALAAE TEQPKWWERK AGPNMIDITS
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.