Factsheet for Bra026460.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89357	Canola	plastid	86.11	86.11
CDX94364	Canola	plastid	83.8	83.41
CDX90776	Canola	plastid	80.56	80.56
AT4G26160.1	Thale cress	plastid	64.81	63.35
PGSC0003DMT400006408	Potato	plastid	45.83	50.77
Solyc03g121480.2.1	Tomato	plastid	45.83	50.0
HORVU1Hr1G028680.1	Barley	plastid	47.22	47.44
TraesCS1A01G124400.2	Wheat	plastid	46.3	47.17
Os05t0200100-01	Rice	plastid	46.76	46.76
TraesCS1B01G142600.2	Wheat	plastid	45.83	46.05
VIT_09s0002g02380.t01	Wine grape	plastid	45.83	45.83
TraesCS1D01G129500.2	Wheat	plastid	45.37	45.58
Bra011127.1-P	Field mustard	plastid	49.07	44.17
Zm00001d037748_P001	Maize	plastid	45.37	44.14
EES19197	Sorghum	plastid	45.37	43.75
Bra024139.1-P	Field mustard	plastid	45.83	41.25
GSMUA_Achr7P13460_001	Banana	mitochondrion	48.61	37.63
Zm00001d010000_P001	Maize	plastid	25.93	34.78
Bra031632.1-P	Field mustard	plastid	31.48	26.05
Bra018614.1-P	Field mustard	plastid	31.48	25.09
Bra021838.1-P	Field mustard	plastid	31.48	25.0
Bra012959.1-P	Field mustard	plastid	28.24	23.28

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra026460	EnsemblPlants:Bra026460.1	EnsemblPlants:Bra026460.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0010109
GO:GO:0015979	GO:GO:0016671	GO:GO:0019725	GO:GO:0045454	GO:GO:0051776	GO:GO:0055114
InterPro:IPR013766	UniProt:M4ECF1	PFAM:PF00085	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF10	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002546FC5
SEG:seg	:	:	:	:	:

Description

AT4G26160 (E=4e-077) ACHT1 | ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor

Coordinates

chrA01:+:9172628..9173754

Molecular Weight (calculated)

24158.8 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.272

Length

216 amino acids

Sequence
(BLAST)

001: MSPPTSFRSL YASSSTRTPI SPPIRIIPLL NSFNRLYGLS FSTSSSLPSS SSNLVFSTRK QSLSIKVQAL TAETEQPKWW EKKAGPNMID ITSTEQFLNA
101: LKDAGDRLVI VDFYGTWCGS CRAMFPKLCK TAEEHPEILF LKVNFDENKS LCKSLNVKVL PYFHLYRGSD GQVDSFSCSL AKFKKLRDAI VRHNVRISTD
201: HSSSVSEQIE DSTSSL

Best Arabidopsis Sequence Match ( AT4G26160.1 )
(BLAST)

001: MSPTTTSLRS LSFSLYASSN STPISTPIEA RQLLSSCNRF YGLSSSSSSS SLTTSSLIGN LVFSSRNQSL SVKVQALAAE TEQPKWWERK AGPNMIDITS
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E

Arabidopsis Description

ACHT1Thioredoxin-like 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.