Factsheet for GSMUA_Achr7P13460_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
golgi 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G028680.1	Barley	plastid	43.01	55.81
TraesCS1A01G124400.2	Wheat	plastid	42.29	55.66
Zm00001d037748_P001	Maize	plastid	44.09	55.41
EES19197	Sorghum	plastid	44.09	54.91
GSMUA_Achr1P14420_001	Banana	plastid	42.29	54.88
Os05t0200100-01	Rice	plastid	42.29	54.63
TraesCS1D01G129500.2	Wheat	plastid	41.58	53.95
TraesCS1B01G142600.2	Wheat	plastid	41.22	53.49
VIT_09s0002g02380.t01	Wine grape	plastid	39.78	51.39
PGSC0003DMT400006408	Potato	plastid	35.48	50.77
Solyc03g121480.2.1	Tomato	plastid	35.84	50.51
Bra026460.1-P	Field mustard	plastid	37.63	48.61
CDX89357	Canola	plastid	36.92	47.69
Zm00001d010000_P001	Maize	plastid	27.24	47.2
CDX94364	Canola	plastid	36.2	46.54
CDX90776	Canola	plastid	35.84	46.3
AT4G26160.1	Thale cress	plastid	36.2	45.7
GSMUA_Achr5P07610_001	Banana	mitochondrion	21.15	30.89
GSMUA_Achr6P32280_001	Banana	plastid	29.03	29.78
GSMUA_Achr8P21480_001	Banana	plastid	27.6	28.95
GSMUA_Achr9P04970_001	Banana	plastid	28.67	28.78
GSMUA_Achr10P...	Banana	cytosol	25.09	23.65
GSMUA_Achr10P...	Banana	mitochondrion	26.16	20.92

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr7G13460_001	EnsemblPlants:GSMUA_Achr7P13460_001
EnsemblPlants:GSMUA_Achr7T13460_001	InterPro:IPR013766	UniProt:M0TH83	PFAM:PF00085	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR43601	PANTHER:PTHR43601:SF10	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000296D245	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G13460_001]

Coordinates

chr7:+:10868712..10872523

Molecular Weight (calculated)

31667.3 Da

IEP (calculated)

10.368

GRAVY (calculated)

-0.352

Length

279 amino acids

Sequence
(BLAST)

001: MRSALKRVHV ASFPFPQTEK RNKVRKNNTR YNKRRNQRRN PLLFLPSDEW IIISVLLSIP FLPLPLLMAD ALLRHGLLLA SHNRLLPLLF LPLQSNSPRL
101: KPSPRSRLDA AFSAALPRPS NRSSGHRVRA VVEEGTDEPK WWEKNGGPNM IDIHSTEEFL DALSQAGDRL VVVEFYGTWC GSCRALFPKL CKTAEEHPDI
201: LFLKVNFDEN KPMCKRLNVR VLPYFHFYRG ADGLLQSFSC NLVKFQKITD AIEKHNSARC SIGPPSGVGD LLDSSTSQN

Best Arabidopsis Sequence Match ( AT4G29670.1 )
(BLAST)

001: MAGVVRLTTT SVQAIRVSSS FSSFATALNP LQPCLPPNSN LNSDKRLRLL SSSPSCSSSH YHPSSGLGSH LPLRRPKSQV VRVKVDENVA ETEPPKWWER
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS

Arabidopsis Description

ACHT2Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.