Factsheet for GSMUA_Achr5P07610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G017310.1	Barley	cytosol	47.64	43.96
GSMUA_Achr8P21480_001	Banana	plastid	58.12	41.73
GSMUA_Achr6P32280_001	Banana	plastid	59.16	41.54
GSMUA_Achr9P04970_001	Banana	plastid	59.16	40.65
CDY66710	Canola	plastid	43.98	37.84
PGSC0003DMT400060823	Potato	mitochondrion	45.55	37.83
KXG39469	Sorghum	plastid	56.02	37.81
Zm00001d047555_P001	Maize	plastid	54.97	37.37
TraesCS4D01G176100.1	Wheat	plastid	53.93	37.32
HORVU4Hr1G051400.3	Barley	plastid	53.4	36.96
TraesCS4A01G130400.1	Wheat	plastid	53.4	36.96
Os07t0684100-01	Rice	plastid	53.93	36.92
TraesCS4B01G174100.1	Wheat	plastid	52.88	36.59
EER92835	Sorghum	plastid	50.79	36.47
KRH06734	Soybean	plastid	56.54	36.12
KRG94786	Soybean	plastid	55.5	35.69
TraesCS2D01G100500.1	Wheat	plastid	50.79	35.66
TraesCS2B01G118100.1	Wheat	plastid	50.79	35.53
TraesCS2A01G100900.1	Wheat	plastid	50.79	35.53
CDY22676	Canola	plastid	49.74	35.32
KXG36973	Sorghum	plastid	51.31	35.0
Zm00001d022518_P002	Maize	plastid	49.74	34.93
Bra031632.1-P	Field mustard	plastid	47.64	34.87
VIT_08s0007g07620.t01	Wine grape	plastid	56.02	34.63
AT1G08570.1	Thale cress	plastid	49.74	34.55
CDY06319	Canola	plastid	47.12	34.48
CDX95049	Canola	plastid	48.17	34.33
Bra018614.1-P	Field mustard	plastid	48.69	34.32
Solyc10g080730.1.1	Tomato	plastid	46.07	34.24
CDX93552	Canola	plastid	48.17	33.82
Zm00001d028992_P001	Maize	plastid	50.26	33.8
Bra021838.1-P	Field mustard	plastid	47.12	33.09
AT2G33270.1	Thale cress	plastid	46.6	32.6
PGSC0003DMT400048452	Potato	plastid	51.31	32.56
Solyc12g019740.1.1	Tomato	plastid	49.74	31.77
CDY37738	Canola	endoplasmic reticulum	45.55	30.1
GSMUA_Achr1P14420_001	Banana	plastid	30.89	27.44
GSMUA_Achr10P...	Banana	cytosol	42.41	27.36
Os03t0326500-01	Rice	mitochondrion	14.14	24.55
GSMUA_Achr10P...	Banana	mitochondrion	40.84	22.35
GSMUA_Achr7P13460_001	Banana	mitochondrion	30.89	21.15

Protein Annotations

EnsemblPlants:GSMUA_Achr5P07610_001	EnsemblPlants:GSMUA_Achr5T07610_001	EnsemblPlantsGene:GSMUA_Achr5G07610_001	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	PFAM:PF00085	SEG:seg	SUPFAM:SSF52833
UniParc:UPI000294AF30	UniProt:M0SWJ0	MapMan:10.5.7	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G07610_001]

Coordinates

chr5:+:5462429..5463874

Molecular Weight (calculated)

21389.1 Da

IEP (calculated)

10.957

GRAVY (calculated)

-0.237

Length

191 amino acids

Sequence
(BLAST)

001: MLSSQRRNPS LAAFRCGASR KIDPLRPSSS SSSSSSKSSS FHGRELVTGP PRGRPRPRFR VTLQMTLPIG KSLEWLDKAL QPNMKVIESA QDLHDSLLNA
101: GDKLVIVDFF SPGCGGCRVL YPMICQFVVM NRGVLFLRIN HEKHKSMCYS LNVHVLPFTR FYRGAHGRLC SFSCTNATIH KFKDALANRS F

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.