Factsheet for GSMUA_Achr10P25740_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
PTS1:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80647	Canola	plastid	22.64	57.66
PGSC0003DMT400083161	Potato	plastid	31.81	50.0
Solyc03g115870.2.1	Tomato	cytosol, plastid	34.67	49.59
Solyc06g069720.2.1	Tomato	plastid	28.08	48.04
PGSC0003DMT400050229	Potato	cytosol	34.1	47.98
KRH54570	Soybean	plastid	35.53	45.76
VIT_17s0000g06370.t01	Wine grape	cytosol, plastid	34.1	45.59
KRH63313	Soybean	plastid	34.38	44.28
GSMUA_Achr10P...	Banana	cytosol	35.82	42.23
AT5G61440.1	Thale cress	plastid	29.23	41.63
GSMUA_Achr5P07610_001	Banana	mitochondrion	22.35	40.84
GSMUA_Achr6P32280_001	Banana	plastid	31.81	40.81
GSMUA_Achr9P04970_001	Banana	plastid	32.38	40.65
GSMUA_Achr8P21480_001	Banana	plastid	30.66	40.23
CDY56937	Canola	plastid	29.23	39.08
Bra012959.1-P	Field mustard	plastid	28.94	38.55
CDY02147	Canola	plastid	28.65	38.17
OQU93158	Sorghum	plastid	20.92	34.43
GSMUA_Achr1P14420_001	Banana	plastid	20.92	33.95
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	25.79	33.33
Os03t0168500-00	Rice	plastid	14.04	27.68
GSMUA_Achr7P13460_001	Banana	mitochondrion	20.92	26.16

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr10G25740_001	EnsemblPlants:GSMUA_Achr10P25740_001
EnsemblPlants:GSMUA_Achr10T25740_001	InterPro:IPR013766	UniProt:M0RLE8	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF4	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000296B0E1
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G25740_001]

Coordinates

chr10:+:29615540..29617087

Molecular Weight (calculated)

38902.5 Da

IEP (calculated)

8.975

GRAVY (calculated)

0.064

Length

349 amino acids

Sequence
(BLAST)

001: MKNALFSPLF RPHQPRARPF SFPVILLPFS FSLPSLGSRP LLLLLEPKNC IFVVCFAPPK SVLVNSVLLF GRQSCCVEKQ NPFFAICQGF ICYYLLKVWF
101: LFLVGLLVEQ REAIFSYLLS SMAISLRYGS YFYGDYQVGT ERKEIGVGSV EVLGGKNEFK GRQIVVKNQS SSDGWNPKGH SHCSIHASNC LPRAMKWWEK
201: SIIPNMTEIT SSDHLVESLA TAGDKLVIVD FYSPGCGGCK ALHPKICQLA ESYPDAIFLK VNYEEHKSMC HSLRIHVLPF FRLYRGAQGR VCSFSCTNAT
301: VKKLKDAMAK HGTERCSLGP AKGLEEEELL VLASNGGARF NRPPALSSI

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.