CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54570	Soybean	plastid	69.74	69.74
CDX80647	Canola	plastid	31.0	61.31
PGSC0003DMT400050229	Potato	cytosol	50.92	55.65
VIT_17s0000g06370.t01	Wine grape	cytosol, plastid	52.4	54.41
Solyc03g115870.2.1	Tomato	cytosol, plastid	48.34	53.69
PGSC0003DMT400083161	Potato	plastid	43.91	53.6
Solyc06g069720.2.1	Tomato	plastid	39.11	51.96
AT5G61440.1	Thale cress	plastid	42.07	46.53
CDY56937	Canola	plastid	41.33	42.91
Bra012959.1-P	Field mustard	plastid	41.33	42.75
CDY02147	Canola	plastid	40.59	41.98
KRG94786	Soybean	plastid	43.54	39.73
KRH06734	Soybean	plastid	43.17	39.13
GSMUA_Achr10P...	Banana	cytosol	42.07	38.51
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	36.53	36.67
OQU93158	Sorghum	plastid	28.04	35.85
GSMUA_Achr10P...	Banana	mitochondrion	44.28	34.38
KRH74152	Soybean	plastid	26.57	33.96
KRH49061	Soybean	plastid	27.31	33.79
Os03t0168500-00	Rice	plastid	20.3	31.07

Protein Annotations

MapMan:10.5.7	EntrezGene:100801871	Gene3D:3.40.30.10	EMBL:ACUP02002664	EnsemblPlantsGene:GLYMA_04G167500	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
UniProt:K7KKM8	EnsemblPlants:KRH63313	ProteinID:KRH63313	ProteinID:KRH63313.1	PFAM:PF00085	PFscan:PS51352
PANTHER:PTHR43601	PANTHER:PTHR43601:SF4	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233A512
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:42054860..42056719

Molecular Weight (calculated)

29546.9 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.039

Length

271 amino acids

Sequence
(BLAST)

001: MACSLNSVFC VPDLNESMFG SRTKGALVPC PSKTGKVKSW GCSVLSNAFM GKSISLDEKG SGCCNSKSSS NIPVHAQATI CVSKALKWWK KTLKPNMIEI
101: HSAQELVHSL VNAGDSLLVV DFYSPGCGGC KALHPKICQI AELYPNATFL KVNYEELKTM CHGLRIHVLP FFRFYRGSEG RVCSFSCTNA TIKKFKDALA
201: KHGSERCSFG PTKGLEESEL KILASIGEIN SSPLLCPKLG KLEDLVMESH DFSGVWSMES NSRGIMLDAI Y

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.