Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80647 Canola plastid 44.49 79.56
CDY56937 Canola plastid 73.06 68.58
Bra012959.1-P Field mustard plastid 71.84 67.18
CDY02147 Canola plastid 71.84 67.18
CDY65919 Canola endoplasmic reticulum, golgi, plastid 54.69 49.63
Solyc06g069720.2.1 Tomato plastid 40.0 48.04
PGSC0003DMT400083161 Potato plastid 42.86 47.3
VIT_17s0000g06370.t01 Wine grape cytosol, plastid 50.2 47.13
Solyc03g115870.2.1 Tomato cytosol, plastid 45.31 45.49
PGSC0003DMT400050229 Potato cytosol 44.9 44.35
KRH54570 Soybean plastid 47.35 42.8
KRH63313 Soybean plastid 46.53 42.07
AT1G08570.1 Thale cress plastid 43.67 38.91
GSMUA_Achr10P... Banana cytosol 44.49 36.82
AT2G33270.1 Thale cress plastid 39.18 35.16
OQU93158 Sorghum plastid 28.57 33.02
GSMUA_Achr10P... Banana mitochondrion 41.63 29.23
AT4G26160.1 Thale cress plastid 25.71 28.51
AT4G29670.2 Thale cress plastid 23.67 24.58
Os03t0168500-00 Rice plastid 17.55 24.29
Protein Annotations
MapMan:10.5.7Gene3D:3.40.30.10EntrezGene:836265Symbol:ACHT5ProteinID:AED97469.1EMBL:AF144389
EMBL:AK229043ArrayExpress:AT5G61440EnsemblPlantsGene:AT5G61440RefSeq:AT5G61440TAIR:AT5G61440RefSeq:AT5G61440-TAIR-G
EnsemblPlants:AT5G61440.1TAIR:AT5G61440.1ProteinID:BAB08500.1EMBL:BT024467GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0019725GO:GO:0045454GO:GO:0055114InterPro:IPR013766RefSeq:NP_200952.1
PFAM:PF00085PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PFscan:PS51352PANTHER:PTHR43601PANTHER:PTHR43601:SF4UniProt:Q9XFI1SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI000009E0BCSEG:seg::
Description
ACHT5Thioredoxin-like 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XFI1]
Coordinates
chr5:+:24707445..24709396
Molecular Weight (calculated)
26891.2 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.248
Length
245 amino acids
Sequence
(BLAST)
001: MDAISSLGTN CVLSGVSPFS QENQSKSKLS PFMSLDLKEH PMASADFTNQ TLTAFSSSSA SPFQAKTSSI GMSRGMRWWE KSTNHNMLEI QSANHLVDSL
101: LNAGDRLVVL DFYSPGCGGC KSLHPKICQL AETNPNVMFL KVNQEELRTM CHGLNVHVLP FFKFYRGAEG KVCSFSCTIA TINKFKKALD KHGSERCSLG
201: DAKGLDEKEL AALASVGELK MNSLTMHQAS NIGYKTEEQY QTMVL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.