Factsheet for GSMUA_Achr10P18740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80647	Canola	plastid	25.68	55.47
PGSC0003DMT400083161	Potato	plastid	34.8	46.4
AT5G61440.1	Thale cress	plastid	36.82	44.49
Solyc06g069720.2.1	Tomato	plastid	30.41	44.12
VIT_17s0000g06370.t01	Wine grape	cytosol, plastid	38.51	43.68
Solyc03g115870.2.1	Tomato	cytosol, plastid	35.81	43.44
GSMUA_Achr5P07610_001	Banana	mitochondrion	27.36	42.41
KRH63313	Soybean	plastid	38.51	42.07
KRH54570	Soybean	plastid	38.18	41.7
GSMUA_Achr9P04970_001	Banana	plastid	38.85	41.37
GSMUA_Achr8P21480_001	Banana	plastid	37.16	41.35
PGSC0003DMT400050229	Potato	cytosol	34.46	41.13
GSMUA_Achr6P32280_001	Banana	plastid	37.5	40.81
Bra012959.1-P	Field mustard	plastid	34.46	38.93
CDY56937	Canola	plastid	34.12	38.7
CDY02147	Canola	plastid	33.78	38.17
GSMUA_Achr10P...	Banana	mitochondrion	42.23	35.82
OQU93158	Sorghum	plastid	25.34	35.38
GSMUA_Achr1P14420_001	Banana	plastid	23.31	32.09
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	28.38	31.11
Os03t0168500-00	Rice	plastid	17.91	29.94
GSMUA_Achr7P13460_001	Banana	mitochondrion	23.65	25.09

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr10G18740_001	EnsemblPlants:GSMUA_Achr10P18740_001
EnsemblPlants:GSMUA_Achr10T18740_001	InterPro:IPR013766	UniProt:M0RJE9	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF9	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002958EB7
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G18740_001]

Coordinates

chr10:+:25329877..25331229

Molecular Weight (calculated)

33181.0 Da

IEP (calculated)

8.287

GRAVY (calculated)

-0.084

Length

296 amino acids

Sequence
(BLAST)

001: MAVPLRSGLS FRCVHETGLE RKETDVPGLD VLSWKNDIKG RRSLLKEPRD SHEWRPQSHP ISPIHNTSVC AARAFRWWEK NTSSNMTEIE STNQLVHSLL
101: HAEDKLVIVD FYSPGCGGCK ALHPKICQQA EMNPSVMLLR VNCEEHKAMC RSLHIHVLPF FRFYRGAQGR VCAFSCTNAT ISKFNNALAK HGMDRCSIGP
201: AKGLEEGELL SLASNPDAHF GYPWRSLSQD LALSIPDESS VGEVEAAAAT AALALRGSQI LSIFHLLIIF LYLQKSVFPF FFFFVNRSVS LVVFHR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.