Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069720.2.1 | Tomato | plastid | 74.32 | 80.88 |
| CDX80647 | Canola | plastid | 36.94 | 59.85 |
| PGSC0003DMT400050229 | Potato | cytosol | 58.56 | 52.42 |
| VIT_17s0000g06370.t01 | Wine grape | cytosol, plastid | 54.5 | 46.36 |
| KRH63313 | Soybean | plastid | 53.6 | 43.91 |
| KRH54570 | Soybean | plastid | 52.7 | 43.17 |
| AT5G61440.1 | Thale cress | plastid | 47.3 | 42.86 |
| CDY56937 | Canola | plastid | 48.65 | 41.38 |
| PGSC0003DMT400060823 | Potato | mitochondrion | 42.79 | 41.3 |
| Bra012959.1-P | Field mustard | plastid | 47.75 | 40.46 |
| CDY02147 | Canola | plastid | 47.3 | 40.08 |
| PGSC0003DMT400048452 | Potato | plastid | 49.1 | 36.21 |
| CDY65919 | Canola | endoplasmic reticulum, golgi, plastid | 43.24 | 35.56 |
| GSMUA_Achr10P... | Banana | cytosol | 46.4 | 34.8 |
| PGSC0003DMT400006408 | Potato | plastid | 28.38 | 32.31 |
| GSMUA_Achr10P... | Banana | mitochondrion | 50.0 | 31.81 |
| OQU93158 | Sorghum | plastid | 29.28 | 30.66 |
| PGSC0003DMT400008881 | Potato | plastid | 31.98 | 30.47 |
| Os03t0168500-00 | Rice | plastid | 20.72 | 25.99 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400083161 | EnsemblPlantsGene:PGSC0003DMG400033085 | EntrezGene:102583325 | Gene3D:3.40.30.10 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF4 | PFAM:PF00085 | PGSC:PGSC0003DMG400033085 | RefSeq:XP_006354773.1 |
| SEG:seg | SUPFAM:SSF52833 | UniParc:UPI0002954C91 | UniProt:M1D6M1 | MapMan:10.5.7 | : |
Description
Thioredoxin II [Source:PGSC_GENE;Acc:PGSC0003DMG400033085]
Coordinates
chr6:+:51574638..51578821
Molecular Weight (calculated)
24239.9 Da
IEP (calculated)
7.893
GRAVY (calculated)
-0.189
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLSTGFS VSVPCFNSRA KGSAHHCYSN GNLQLKDLTS REFLGKSLDV SDHRQAQVEI CVGSGQGWWE KTLKPNMVEI NSAQQLVDSL LKAGDRLVII
101: DFYSPGCGGC KTLHPKMCEL AESNPNAIFL KVNYEELKSM CNVLHIPVLP FFRFYKGAQG KVCSFSCTNA TIKKFKDAVA RYGDEGCSFS PAKGLEESEL
201: LTLASIGQIS KKSSFDSSSI QE
101: DFYSPGCGGC KTLHPKMCEL AESNPNAIFL KVNYEELKSM CNVLHIPVLP FFRFYKGAQG KVCSFSCTNA TIKKFKDAVA RYGDEGCSFS PAKGLEESEL
201: LTLASIGQIS KKSSFDSSSI QE
001: MTEVISKTSL FLGACGNHHR VDDFSFSPIV FGDSQDESFR RSSAITAQTT LRIGTAQKWW EKGLKDNMRE ISSAQELVDS LTNAGDKLVV VDFFSPGCGG
101: CKALHPKICQ FAEMNPDVQF LQVNYEEHKS MCYSLGVHVL PFFRFYRGSQ GRVCSFSCTN ATIKKFRDAL AKHGPDRCSL GPTKGLEEKE LVALAANKEL
201: NFTYTPKPVP VEKEAATPDS NPSLPVPLPS MSSNDEKTLV SAGR
101: CKALHPKICQ FAEMNPDVQF LQVNYEEHKS MCYSLGVHVL PFFRFYRGSQ GRVCSFSCTN ATIKKFRDAL AKHGPDRCSL GPTKGLEEKE LVALAANKEL
201: NFTYTPKPVP VEKEAATPDS NPSLPVPLPS MSSNDEKTLV SAGR
Arabidopsis Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.