Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43516 | Canola | plastid | 69.92 | 68.18 |
| Bra024139.1-P | Field mustard | plastid | 61.44 | 60.42 |
| CDY30208 | Canola | plastid | 61.44 | 60.42 |
| CDY54277 | Canola | plastid | 61.02 | 59.26 |
| Bra011127.1-P | Field mustard | plastid | 58.05 | 57.08 |
| KRH74152 | Soybean | plastid | 45.34 | 50.47 |
| VIT_11s0016g02310.t01 | Wine grape | plastid | 44.07 | 50.24 |
| KRH49061 | Soybean | plastid | 46.61 | 50.23 |
| GSMUA_Achr1P14420_001 | Banana | plastid | 42.37 | 46.51 |
| PGSC0003DMT400008881 | Potato | plastid | 44.07 | 44.64 |
| AT4G26160.1 | Thale cress | plastid | 40.68 | 43.44 |
| AT1G08570.1 | Thale cress | plastid | 28.39 | 24.36 |
| AT2G33270.1 | Thale cress | plastid | 27.54 | 23.81 |
| AT5G61440.1 | Thale cress | plastid | 24.58 | 23.67 |
Protein Annotations
| MapMan:10.5.7 | Gene3D:3.40.30.10 | EntrezGene:829088 | Symbol:ACHT2 | ProteinID:AEE85659.1 | ProteinID:AEE85660.1 |
| EMBL:AF370616 | EMBL:AF386933 | ArrayExpress:AT4G29670 | EnsemblPlantsGene:AT4G29670 | RefSeq:AT4G29670 | TAIR:AT4G29670 |
| RefSeq:AT4G29670-TAIR-G | EnsemblPlants:AT4G29670.2 | TAIR:AT4G29670.2 | EMBL:AY072462 | EMBL:AY086416 | ProteinID:CAB45327.1 |
| ProteinID:CAB79725.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016671 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | RefSeq:NP_567831.1 |
| RefSeq:NP_849469.1 | PFAM:PF00085 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF10 | UniProt:Q8LCT3 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI000009CD39 | SEG:seg | : |
Description
ACHT2Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]
Coordinates
chr4:-:14535507..14537352
Molecular Weight (calculated)
26338.7 Da
IEP (calculated)
9.342
GRAVY (calculated)
-0.106
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVVRLTTT SVQAIRVSSS FSSFATALNP LQPCLPPNSN LNSDKRLRLL SSSPSCSSSH YHPSSGLGSH LPLRRPKSQV VRVKVDENVA ETEPPKWWER
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKV
201: KKAISVSPFP QLELGITLQT KRTTSLFFFD RIYQIL
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKV
201: KKAISVSPFP QLELGITLQT KRTTSLFFFD RIYQIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.