Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43516 | Canola | plastid | 77.92 | 77.27 |
| Bra024139.1-P | Field mustard | plastid | 75.42 | 75.42 |
| VIT_11s0016g02310.t01 | Wine grape | plastid | 53.33 | 61.84 |
| AT4G29670.2 | Thale cress | plastid | 57.08 | 58.05 |
| KRH74152 | Soybean | plastid | 49.17 | 55.66 |
| GSMUA_Achr1P14420_001 | Banana | plastid | 49.17 | 54.88 |
| KRH49061 | Soybean | plastid | 49.17 | 53.88 |
| PGSC0003DMT400008881 | Potato | plastid | 50.0 | 51.5 |
| Bra026460.1-P | Field mustard | plastid | 44.17 | 49.07 |
| Bra031632.1-P | Field mustard | plastid | 31.25 | 28.74 |
| Bra018614.1-P | Field mustard | plastid | 31.25 | 27.68 |
| Bra012959.1-P | Field mustard | plastid | 30.0 | 27.48 |
| Bra021838.1-P | Field mustard | plastid | 30.42 | 26.84 |
Protein Annotations
| MapMan:10.5.7 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra011127 | EnsemblPlants:Bra011127.1 | EnsemblPlants:Bra011127.1-P | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| UniProt:M4D3S3 | PFAM:PF00085 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF10 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0002545525 | SEG:seg |
Description
AT4G29670 (E=6e-096) ACHT2 | thioredoxin family protein
Coordinates
chrA01:+:3779428..3780761
Molecular Weight (calculated)
26321.6 Da
IEP (calculated)
9.523
GRAVY (calculated)
-0.220
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVVRLSTT SVQAIRVSSS FATTLNSLKP CSPPNLNSDK RLRLLSSSSP SCSSAHYPSS GLASHIPLKR SKSKLVRVKV DETVAETEPP KWWERNAGPN
101: MVDIHSTEEF LKALSEAGER LVIVEFYGTW CASCRALFPK LCKTAVEHPD ILFLKVNFDE NKPMCKSLNV KVLPYFHFYR GADGQLESFS CSLAKFQKIK
201: DAIRLHNTDR CSISPAKGPE GFTLVSLSVQ TNAAKPAGSS
101: MVDIHSTEEF LKALSEAGER LVIVEFYGTW CASCRALFPK LCKTAVEHPD ILFLKVNFDE NKPMCKSLNV KVLPYFHFYR GADGQLESFS CSLAKFQKIK
201: DAIRLHNTDR CSISPAKGPE GFTLVSLSVQ TNAAKPAGSS
001: MAGVVRLTTT SVQAIRVSSS FSSFATALNP LQPCLPPNSN LNSDKRLRLL SSSPSCSSSH YHPSSGLGSH LPLRRPKSQV VRVKVDENVA ETEPPKWWER
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS
Arabidopsis Description
ACHT2Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.