Factsheet for Bra024139.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30208	Canola	plastid	100.0	100.0
Bra011127.1-P	Field mustard	plastid	75.42	75.42
AT4G29670.2	Thale cress	plastid	60.42	61.44
VIT_11s0016g02310.t01	Wine grape	plastid	52.5	60.87
KRH74152	Soybean	plastid	50.0	56.6
PGSC0003DMT400008881	Potato	plastid	53.75	55.36
GSMUA_Achr1P14420_001	Banana	plastid	48.75	54.42
KRH49061	Soybean	plastid	49.58	54.34
Bra026460.1-P	Field mustard	plastid	41.25	45.83
Bra021838.1-P	Field mustard	plastid	31.67	27.94
Bra031632.1-P	Field mustard	plastid	30.0	27.59
Bra012959.1-P	Field mustard	plastid	29.58	27.1
Bra018614.1-P	Field mustard	plastid	29.17	25.83

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra024139	EnsemblPlants:Bra024139.1	EnsemblPlants:Bra024139.1-P	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
UniProt:M4E5T5	PFAM:PF00085	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR43601	PANTHER:PTHR43601:SF10
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002540D2E	SEG:seg

Description

AT4G29670 (E=8e-097) ACHT2 | thioredoxin family protein

Coordinates

chrA03:-:27352468..27353539

Molecular Weight (calculated)

26311.4 Da

IEP (calculated)

9.137

GRAVY (calculated)

-0.268

Length

240 amino acids

Sequence
(BLAST)

001: MAGVVRLSTT SVQTLGVSSS PFTSFAATLS SPCLPPNLNS DKRLRHLSSS PSCSSPHYSA SGLRSHSLLR RPNSKVVRVK VDESVTEAEP PKWWERNAPN
101: MVDIHSTEEF LKALSEAGER LVIVEFYGTW CASCRALFPK LCKTAVENPN IVFLKVNFDE NKPMCKSLNV KVLPYFHFYR GADGQLESFS CSLAKFQKIK
201: DGIRLHNTDR CSIGPAKGPE GFTLESLSVQ TNAAKPAGSS

Best Arabidopsis Sequence Match ( AT4G29670.1 )
(BLAST)

001: MAGVVRLTTT SVQAIRVSSS FSSFATALNP LQPCLPPNSN LNSDKRLRLL SSSPSCSSSH YHPSSGLGSH LPLRRPKSQV VRVKVDENVA ETEPPKWWER
101: NAPNMVDIHS TEEFLSALSG AGERLVIVEF YGTWCASCRA LFPKLCKTAV EHPDIVFLKV NFDENKPMCK SLNVRVLPFF HFYRGADGQL ESFSCSLAKF
201: QKIKDAIQLH NTDRCSLGPA KVPEGLTLAK PAASS

Arabidopsis Description

ACHT2Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.