Factsheet for Bra021838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G33270.1	Thale cress	plastid	72.43	72.16
CDY66710	Canola	plastid	56.99	69.82
CDY37738	Canola	endoplasmic reticulum	65.81	61.94
HORVU2Hr1G017310.1	Barley	cytosol	40.44	53.14
PGSC0003DMT400060823	Potato	mitochondrion	42.28	50.0
Solyc10g080730.1.1	Tomato	plastid	45.22	47.86
GSMUA_Achr5P07610_001	Banana	mitochondrion	33.09	47.12
GSMUA_Achr8P21480_001	Banana	plastid	45.96	46.99
Bra031632.1-P	Field mustard	plastid	44.12	45.98
KRH06734	Soybean	plastid	49.26	44.82
KRG94786	Soybean	plastid	48.9	44.78
HORVU4Hr1G051400.3	Barley	plastid	45.22	44.57
TraesCS4D01G176100.1	Wheat	plastid	45.22	44.57
GSMUA_Achr6P32280_001	Banana	plastid	44.49	44.49
TraesCS4A01G130400.1	Wheat	plastid	44.85	44.2
Bra018614.1-P	Field mustard	plastid	43.75	43.91
TraesCS4B01G174100.1	Wheat	plastid	44.49	43.84
GSMUA_Achr9P04970_001	Banana	plastid	44.49	43.53
PGSC0003DMT400048452	Potato	plastid	48.16	43.52
TraesCS2D01G100500.1	Wheat	plastid	43.38	43.38
Os07t0684100-01	Rice	plastid	44.49	43.37
EER92835	Sorghum	plastid	42.28	43.23
TraesCS2B01G118100.1	Wheat	plastid	43.01	42.86
TraesCS2A01G100900.1	Wheat	plastid	42.65	42.49
Zm00001d022518_P002	Maize	plastid	42.28	42.28
Os03t0326500-01	Rice	mitochondrion	16.91	41.82
Solyc12g019740.1.1	Tomato	plastid	45.59	41.47
KXG39469	Sorghum	plastid	43.01	41.34
VIT_08s0007g07620.t01	Wine grape	plastid	46.69	41.1
KXG36973	Sorghum	plastid	41.91	40.71
Zm00001d047555_P001	Maize	plastid	41.91	40.57
Zm00001d028992_P001	Maize	plastid	42.28	40.49
Bra012959.1-P	Field mustard	plastid	37.5	38.93
Bra024139.1-P	Field mustard	plastid	27.94	31.67
Bra026460.1-P	Field mustard	plastid	25.0	31.48
Bra011127.1-P	Field mustard	plastid	26.84	30.42

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra021838	EnsemblPlants:Bra021838.1	EnsemblPlants:Bra021838.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	UniProt:M4DZ91	PFAM:PF00085
PFscan:PS51352	PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI00025452D7	SEG:seg	:	:	:	:

Description

AT2G33270 (E=4e-109) ACHT3 | ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)

Coordinates

chrA04:+:14801443..14802757

Molecular Weight (calculated)

30742.1 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.463

Length

272 amino acids

Sequence
(BLAST)

001: MATDTFIKLN PIFINPNRFN LRECSNLSPK SISSLSCISP RLISCSHVNP RTLIYGENDN ILFPKKKIPS MIRCQTSLGI GRNQKWWEKE LKPNMKSVTS
101: PQDLVDSLLN AGDKLVVVDF FSPGCGGCKA LHPKICKIAE KNPEVEFLQV NYEEQRSLCQ SLHVHVLPFF RFYRGSSGRV CSFSCTNATI NKFKEALEKH
201: GREQCSIGKT KGLEEKELVA MATNKDLSFD YKPKNNEVNR EIKENDTIIQ RSPTSKEQDE KRSLVISPAG IV

Best Arabidopsis Sequence Match ( AT2G33270.1 )
(BLAST)

001: MATDSFIKLN PISFNRARFD LRDFAGISPK SISSLCCISP RLISCNHFSP RTLISGENGN ILFSKKKIPA FVRCQTSLGI GRNQKWWEKE LKPNMKSVTS
101: PQDLVVSLRN AGDKLVVVDF FSPSCGGCKA LHPKICKIAE KNPEVEFLQV NYEEHRSLCQ SLNIHVLPFF RFYRGSSGRV CSFSCTNATI RKFKEALEKH
201: GREQCSIGET KGLEEKELVA MAANKDLSFD YKPTSCGNIQ EQKKKEIFLP KSPTFNKQKE VEHSLLLVSP APA

Arabidopsis Description

ACHT3Thioredoxin-like 1-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22779]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.