CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021838.1-P	Field mustard	plastid	69.82	56.99
CDX80647	Canola	plastid	32.88	53.28
CDY37738	Canola	endoplasmic reticulum	68.02	52.25
AT2G33270.1	Thale cress	plastid	61.26	49.82
GSMUA_Achr5P07610_001	Banana	mitochondrion	37.84	43.98
HORVU2Hr1G017310.1	Barley	cytosol	38.74	41.55
PGSC0003DMT400060823	Potato	mitochondrion	38.74	37.39
GSMUA_Achr8P21480_001	Banana	plastid	44.14	36.84
CDY06319	Canola	plastid	43.24	36.78
Solyc10g080730.1.1	Tomato	plastid	41.89	36.19
CDY22676	Canola	plastid	43.24	35.69
CDX95049	Canola	plastid	42.34	35.07
KRH06734	Soybean	plastid	46.85	34.78
TraesCS4D01G176100.1	Wheat	plastid	42.79	34.42
HORVU4Hr1G051400.3	Barley	plastid	42.79	34.42
KRG94786	Soybean	plastid	45.95	34.34
CDX93552	Canola	plastid	41.89	34.19
TraesCS4A01G130400.1	Wheat	plastid	42.34	34.06
TraesCS4B01G174100.1	Wheat	plastid	41.89	33.7
Os07t0684100-01	Rice	plastid	41.89	33.33
KXG39469	Sorghum	plastid	41.89	32.86
GSMUA_Achr6P32280_001	Banana	plastid	40.09	32.72
PGSC0003DMT400048452	Potato	plastid	44.14	32.56
Zm00001d047555_P001	Maize	plastid	40.99	32.38
GSMUA_Achr9P04970_001	Banana	plastid	40.54	32.37
EER92835	Sorghum	plastid	38.74	32.33
TraesCS2A01G100900.1	Wheat	plastid	39.64	32.23
TraesCS2B01G118100.1	Wheat	plastid	39.64	32.23
Solyc12g019740.1.1	Tomato	plastid	43.24	32.11
VIT_08s0007g07620.t01	Wine grape	plastid	44.59	32.04
TraesCS2D01G100500.1	Wheat	plastid	39.19	31.99
CDX89357	Canola	plastid	30.63	31.48
KXG36973	Sorghum	plastid	39.64	31.43
Zm00001d028992_P001	Maize	plastid	40.09	31.34
CDY56937	Canola	plastid	36.49	31.03
Zm00001d022518_P002	Maize	plastid	37.84	30.88
CDY02147	Canola	plastid	36.04	30.53
CDX90776	Canola	plastid	28.83	29.63
CDX94364	Canola	plastid	27.93	28.57
CDY65919	Canola	endoplasmic reticulum, golgi, plastid	31.53	25.93
CDY30208	Canola	plastid	27.48	25.42
CDY43516	Canola	plastid	27.48	25.21
CDY54277	Canola	plastid	26.58	24.28
Os03t0326500-01	Rice	mitochondrion	9.91	20.0

Protein Annotations

MapMan:10.5.7	Gene3D:3.40.30.10	GO:A0A078JJU6	UniProt:A0A078JJU6	EnsemblPlants:CDY66710	ProteinID:CDY66710
ProteinID:CDY66710.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00055614001	InterPro:IPR013766	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR43601
PANTHER:PTHR43601:SF9	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0004EE5289
SEG:seg	:	:	:	:	:

Description

BnaCnng52010DBnaCnng52010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJU6]

Coordinates

chrLK035420:-:1094..2525

Molecular Weight (calculated)

25330.8 Da

IEP (calculated)

9.280

GRAVY (calculated)

-0.187

Length

222 amino acids

Sequence
(BLAST)

001: MATDTFIKLN PIFINPNRFN LRECSNLSPK SISSLSCISP RLISCSHVNP RTLIYGENDN ILFPKKKIPS MIRCQTSLGI GRNQKWWEKE LKPNMKSVTS
101: PQDLVDSLLN AGDKLVVVDF FSPGCGGCKA LYPKLCKIAE KNPEVEFLQV NYEEQRSLCQ SLHVHVLPFF RFYRGSSGRV CSFSCTNATV IFYFYSFFSS
201: LYKEKLGSIY TKKTNICKIP YD

Best Arabidopsis Sequence Match ( AT2G33270.1 )
(BLAST)

001: MATDSFIKLN PISFNRARFD LRDFAGISPK SISSLCCISP RLISCNHFSP RTLISGENGN ILFSKKKIPA FVRCQTSLGI GRNQKWWEKE LKPNMKSVTS
101: PQDLVVSLRN AGDKLVVVDF FSPSCGGCKA LHPKICKIAE KNPEVEFLQV NYEEHRSLCQ SLNIHVLPFF RFYRGSSGRV CSFSCTNATI RKFKEALEKH
201: GREQCSIGET KGLEEKELVA MAANKDLSFD YKPTSCGNIQ EQKKKEIFLP KSPTFNKQKE VEHSLLLVSP APA

Arabidopsis Description

ACHT3Thioredoxin-like 1-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22779]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.