Factsheet for HORVU4Hr1G051400.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G130400.1	Wheat	plastid	96.38	96.38
TraesCS4D01G176100.1	Wheat	plastid	95.29	95.29
TraesCS4B01G174100.1	Wheat	plastid	95.29	95.29
Os03t0326500-01	Rice	mitochondrion	29.71	74.55
Zm00001d047555_P001	Maize	plastid	69.57	68.33
EER92835	Sorghum	plastid	65.58	68.05
KXG39469	Sorghum	plastid	69.57	67.84
HORVU2Hr1G017310.1	Barley	cytosol	50.72	67.63
Zm00001d028992_P001	Maize	plastid	64.13	62.32
GSMUA_Achr8P21480_001	Banana	plastid	55.8	57.89
GSMUA_Achr6P32280_001	Banana	plastid	56.88	57.72
GSMUA_Achr9P04970_001	Banana	plastid	57.97	57.55
Bra031632.1-P	Field mustard	plastid	53.62	56.7
CDY06319	Canola	plastid	52.17	55.17
CDY22676	Canola	plastid	53.62	55.02
CDX95049	Canola	plastid	53.26	54.85
Bra018614.1-P	Field mustard	plastid	53.62	54.61
CDX93552	Canola	plastid	53.62	54.41
AT1G08570.1	Thale cress	plastid	53.99	54.18
KRG94786	Soybean	plastid	57.97	53.87
GSMUA_Achr5P07610_001	Banana	mitochondrion	36.96	53.4
PGSC0003DMT400060823	Potato	mitochondrion	44.2	53.04
KRH06734	Soybean	plastid	57.25	52.84
Solyc10g080730.1.1	Tomato	plastid	47.83	51.36
VIT_08s0007g07620.t01	Wine grape	plastid	53.62	47.9
Solyc12g019740.1.1	Tomato	plastid	50.36	46.49
PGSC0003DMT400048452	Potato	plastid	50.36	46.18
Bra021838.1-P	Field mustard	plastid	44.57	45.22
AT2G33270.1	Thale cress	plastid	42.75	43.22
CDY66710	Canola	plastid	34.42	42.79
CDY37738	Canola	endoplasmic reticulum	41.67	39.79
HORVU1Hr1G028680.1	Barley	plastid	28.26	36.28

Protein Annotations

EMBL:AK371865	EnsemblPlants:HORVU4Hr1G051400.3	EnsemblPlantsGene:HORVU4Hr1G051400	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	PFAM:PF00085	PFscan:PS51352	SEG:seg
SUPFAM:SSF52833	UniParc:UPI0002007F10	UniProt:F2E6U1	MapMan:10.5.7	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E6U1]

Coordinates

chrchr4H:-:422335298..422337380

Molecular Weight (calculated)

29952.2 Da

IEP (calculated)

10.500

GRAVY (calculated)

-0.272

Length

276 amino acids

Sequence
(BLAST)

001: MATAQAVAKG TVVSPCGTRA AGFGARRRGA VAARMSPCAP AAVRIGRKSP FLGARLTVGP RRSKLVPRNL VSSPVQMNLA FAKSTKWWEK GLKPNMREIE
101: SAQDLVDSLA NAGDRLVVVD FFSPGCGGCR ALHPKICQFG EQNPDVLFLQ VNYEEHKSMC YSLHVHVLPF FRFYRGAQGR LCSFSCTNAT IKKFRDALAK
201: HNPDRCSIGP TRGLEESELL ALAANKDLQF TYTKQPEPVP SGDSEFIAPG SPRLPPPAKP LVRQGSGERT LVSSGR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.