Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG39469 | Sorghum | plastid | 80.07 | 79.51 |
TraesCS4A01G130400.1 | Wheat | plastid | 69.75 | 71.01 |
Zm00001d028992_P001 | Maize | plastid | 71.53 | 70.77 |
TraesCS4D01G176100.1 | Wheat | plastid | 69.04 | 70.29 |
HORVU4Hr1G051400.3 | Barley | plastid | 68.33 | 69.57 |
TraesCS4B01G174100.1 | Wheat | plastid | 67.97 | 69.2 |
Os03t0326500-01 | Rice | mitochondrion | 26.69 | 68.18 |
Zm00001d022518_P002 | Maize | plastid | 54.45 | 56.25 |
GSMUA_Achr8P21480_001 | Banana | plastid | 53.02 | 56.02 |
Bra031632.1-P | Field mustard | plastid | 51.25 | 55.17 |
GSMUA_Achr5P07610_001 | Banana | mitochondrion | 37.37 | 54.97 |
CDY06319 | Canola | plastid | 50.53 | 54.41 |
GSMUA_Achr9P04970_001 | Banana | plastid | 53.74 | 54.32 |
AT1G08570.1 | Thale cress | plastid | 53.02 | 54.18 |
GSMUA_Achr6P32280_001 | Banana | plastid | 52.31 | 54.04 |
PGSC0003DMT400060823 | Potato | mitochondrion | 44.13 | 53.91 |
CDY22676 | Canola | plastid | 50.89 | 53.16 |
CDX95049 | Canola | plastid | 50.53 | 52.99 |
CDX93552 | Canola | plastid | 51.25 | 52.94 |
Bra018614.1-P | Field mustard | plastid | 50.89 | 52.77 |
KRG94786 | Soybean | plastid | 54.45 | 51.52 |
KRH06734 | Soybean | plastid | 54.8 | 51.51 |
Solyc10g080730.1.1 | Tomato | plastid | 46.26 | 50.58 |
VIT_08s0007g07620.t01 | Wine grape | plastid | 53.02 | 48.22 |
PGSC0003DMT400048452 | Potato | plastid | 51.25 | 47.84 |
Solyc12g019740.1.1 | Tomato | plastid | 48.04 | 45.15 |
Bra021838.1-P | Field mustard | plastid | 40.57 | 41.91 |
AT2G33270.1 | Thale cress | plastid | 40.21 | 41.39 |
CDY66710 | Canola | plastid | 32.38 | 40.99 |
CDY37738 | Canola | endoplasmic reticulum | 40.57 | 39.45 |
Zm00001d037748_P001 | Maize | plastid | 29.54 | 37.39 |
Zm00001d010000_P001 | Maize | plastid | 20.64 | 36.02 |
Protein Annotations
MapMan:10.5.7 | EntrezGene:100193986 | Gene3D:3.40.30.10 | ProteinID:AQL06976.1 | UniProt:B4FH04 | EMBL:BT036392 |
EMBL:EU962839 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
GO:GO:0045454 | InterPro:IPR013766 | PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF9 |
SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00017B725D | EnsemblPlantsGene:Zm00001d047555 | EnsemblPlants:Zm00001d047555_P001 |
EnsemblPlants:Zm00001d047555_T001 | SEG:seg | : | : | : | : |
Description
Thioredoxin-like 1-1 chloroplastic
Coordinates
chr9:+:135294592..135297188
Molecular Weight (calculated)
30792.3 Da
IEP (calculated)
10.293
GRAVY (calculated)
-0.284
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAQVVAKG SVVSPCGNRA VPGLLGRRRD AVAAQMTPSA VRIGGSWRKN AFPGVRLALG TRRSRPASRS FSASPVQMNM NLAIGKSMRW WEKGLQPNMR
101: EIESAQDLVD SLTNAGERLV VVDFFSPGCG GCRALHPKIC QFAERNPDVL FLQVNYEEHK SMCYSLRVHV LPFFRFYRGA QGRLCSFSCT NATIKKFKDA
201: LAKHKPDRCT FGPTRGLDES ELLALAANKE LQFTYTREPE LTPMGDTPGE VIAPEPAKLP AATKPLVKLG SEERSLVSPG R
101: EIESAQDLVD SLTNAGERLV VVDFFSPGCG GCRALHPKIC QFAERNPDVL FLQVNYEEHK SMCYSLRVHV LPFFRFYRGA QGRLCSFSCT NATIKKFKDA
201: LAKHKPDRCT FGPTRGLDES ELLALAANKE LQFTYTREPE LTPMGDTPGE VIAPEPAKLP AATKPLVKLG SEERSLVSPG R
001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
Arabidopsis Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.