CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94786	Soybean	plastid	83.28	83.84
HORVU2Hr1G017310.1	Barley	cytosol	45.15	65.22
Os03t0326500-01	Rice	mitochondrion	22.41	60.91
PGSC0003DMT400060823	Potato	mitochondrion	46.15	60.0
CDX95049	Canola	plastid	53.18	59.33
AT1G08570.1	Thale cress	plastid	53.85	58.55
Bra018614.1-P	Field mustard	plastid	52.84	58.3
CDY06319	Canola	plastid	50.5	57.85
TraesCS4D01G176100.1	Wheat	plastid	53.18	57.61
TraesCS4A01G130400.1	Wheat	plastid	53.18	57.61
HORVU4Hr1G051400.3	Barley	plastid	52.84	57.25
Bra031632.1-P	Field mustard	plastid	49.83	57.09
Solyc10g080730.1.1	Tomato	plastid	48.83	56.81
EER92835	Sorghum	plastid	50.5	56.77
GSMUA_Achr5P07610_001	Banana	mitochondrion	36.12	56.54
TraesCS4B01G174100.1	Wheat	plastid	52.17	56.52
CDX93552	Canola	plastid	50.84	55.88
GSMUA_Achr6P32280_001	Banana	plastid	50.5	55.51
CDY22676	Canola	plastid	49.83	55.39
KXG39469	Sorghum	plastid	52.17	55.12
GSMUA_Achr9P04970_001	Banana	plastid	51.17	55.04
Zm00001d047555_P001	Maize	plastid	51.51	54.8
GSMUA_Achr8P21480_001	Banana	plastid	48.49	54.51
VIT_08s0007g07620.t01	Wine grape	plastid	55.52	53.72
TraesCS2D01G100500.1	Wheat	plastid	48.83	53.68
TraesCS2B01G118100.1	Wheat	plastid	48.83	53.48
PGSC0003DMT400048452	Potato	plastid	53.51	53.16
KXG36973	Sorghum	plastid	49.5	52.86
TraesCS2A01G100900.1	Wheat	plastid	48.16	52.75
Os07t0684100-01	Rice	plastid	48.49	51.97
Zm00001d022518_P002	Maize	plastid	47.16	51.84
Zm00001d028992_P001	Maize	plastid	48.83	51.41
Solyc12g019740.1.1	Tomato	plastid	50.5	50.5
Bra021838.1-P	Field mustard	plastid	44.82	49.26
CDY66710	Canola	plastid	34.78	46.85
CDY37738	Canola	endoplasmic reticulum	45.15	46.71
AT2G33270.1	Thale cress	plastid	41.81	45.79
KRH63313	Soybean	plastid	39.13	43.17
KRH54570	Soybean	plastid	38.8	42.8
KRH74152	Soybean	plastid	25.08	35.38
KRH49061	Soybean	plastid	25.08	34.25

Protein Annotations

MapMan:10.5.7	EntrezGene:100816892	Gene3D:3.40.30.10	EMBL:ACUP02009865	EnsemblPlantsGene:GLYMA_16G042700	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	UniProt:I1ML39
InterPro:IPR013766	EnsemblPlants:KRH06734	ProteinID:KRH06734	ProteinID:KRH06734.1	PFAM:PF00085	PFscan:PS51352
PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233EBF7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:3982381..3984873

Molecular Weight (calculated)

33010.3 Da

IEP (calculated)

9.837

GRAVY (calculated)

-0.390

Length

299 amino acids

Sequence
(BLAST)

001: MAEVLTKASL VSSSWHGVSQ RHHHRRVSTV LSNNTCSFRS GVGKFSSLKM NSQVLRSWSS SSEFQGKKLV FHVNRGLPNR VNSRLRASTG TQMNLRLGKV
101: QKWWEKGLQP NMKEVTSAQD FVDSLLNAGD KLVVVDFFSP GCGGCKALHP KICQFAEMNP DVQFLQVNYE EHKSMCYSLN VHVLPFFRFY RGAHGRLCSF
201: SCTNATIKKF KDALAKHTPD RCSLGPTIGL EEKELEALAA NKDLSFTYSP KPLQPSHENE ELATETASAP ALGSGSLPSP SMTLNAVASN ERTLTTSGR

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.