Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G017310.1 | Barley | cytosol | 57.71 | 77.78 |
| KXG36973 | Sorghum | plastid | 73.12 | 72.86 |
| TraesCS2A01G100900.1 | Wheat | plastid | 70.25 | 71.79 |
| TraesCS2D01G100500.1 | Wheat | plastid | 69.53 | 71.32 |
| Zm00001d022518_P002 | Maize | plastid | 68.46 | 70.22 |
| TraesCS2B01G118100.1 | Wheat | plastid | 68.46 | 69.96 |
| Os03t0326500-01 | Rice | mitochondrion | 22.94 | 58.18 |
| PGSC0003DMT400060823 | Potato | mitochondrion | 45.88 | 55.65 |
| GSMUA_Achr8P21480_001 | Banana | plastid | 53.05 | 55.64 |
| Bra031632.1-P | Field mustard | plastid | 51.61 | 55.17 |
| CDY06319 | Canola | plastid | 50.9 | 54.41 |
| GSMUA_Achr9P04970_001 | Banana | plastid | 54.12 | 54.32 |
| GSMUA_Achr5P07610_001 | Banana | mitochondrion | 36.92 | 53.93 |
| CDX93552 | Canola | plastid | 51.97 | 53.31 |
| CDY22676 | Canola | plastid | 51.25 | 53.16 |
| GSMUA_Achr6P32280_001 | Banana | plastid | 51.61 | 52.94 |
| Bra018614.1-P | Field mustard | plastid | 51.25 | 52.77 |
| AT1G08570.1 | Thale cress | plastid | 51.97 | 52.73 |
| CDX95049 | Canola | plastid | 49.82 | 51.87 |
| Solyc10g080730.1.1 | Tomato | plastid | 46.24 | 50.19 |
| VIT_08s0007g07620.t01 | Wine grape | plastid | 54.48 | 49.19 |
| KRH06734 | Soybean | plastid | 51.97 | 48.49 |
| KRG94786 | Soybean | plastid | 51.61 | 48.48 |
| PGSC0003DMT400048452 | Potato | plastid | 50.9 | 47.18 |
| Solyc12g019740.1.1 | Tomato | plastid | 48.03 | 44.82 |
| Bra021838.1-P | Field mustard | plastid | 43.37 | 44.49 |
| CDY37738 | Canola | endoplasmic reticulum | 43.73 | 42.21 |
| CDY66710 | Canola | plastid | 33.33 | 41.89 |
| AT2G33270.1 | Thale cress | plastid | 40.86 | 41.76 |
| Os05t0200100-01 | Rice | plastid | 26.52 | 34.26 |
| Os03t0168500-00 | Rice | plastid | 19.71 | 31.07 |
Protein Annotations
| MapMan:10.5.7 | Gene3D:3.40.30.10 | EntrezGene:4344321 | EMBL:AK066094 | EMBL:AK104552 | EMBL:AK105051 |
| ProteinID:BAC83807.1 | ProteinID:BAF22583.1 | ProteinID:BAT03271.1 | ProteinID:EAZ41125.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | EnsemblPlantsGene:Os07g0684100 |
| EnsemblPlants:Os07t0684100-01 | PFAM:PF00085 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF2 | UniProt:Q6Z4N3 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00001BF46A | RefSeq:XP_015646723.1 | SEG:seg |
Description
Similar to Thioredoxin-like 1. (Os07t0684100-01)
Coordinates
chr7:-:29011661..29013252
Molecular Weight (calculated)
29770.9 Da
IEP (calculated)
8.398
GRAVY (calculated)
-0.061
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEALCSGSV ASPCGEVGVG FAAGLVRGAA AAAALAESVP IGGYSSKSTF PSGRVALTER KARPLPRNLE AAHGQMNLTI GKAMRWWEKC LQPNMREIES
101: AQDLADSLLN AGDKLVVVDF FSPGCGGCRA LHPKIAQLAE KNPEVLFLQV NYEKHKSMCY SLHVHVLPFF RFYRGAQGRV SSFSCTNATI KKFKDALAKH
201: GPDRCGLGPA KGLEESELMA LAINRDLNFT YTPNQDLVPI ADALLKEAAA PGGPWLPLPA TATQLFIQGS ENSLLSSGR
101: AQDLADSLLN AGDKLVVVDF FSPGCGGCRA LHPKIAQLAE KNPEVLFLQV NYEKHKSMCY SLHVHVLPFF RFYRGAQGRV SSFSCTNATI KKFKDALAKH
201: GPDRCGLGPA KGLEESELMA LAINRDLNFT YTPNQDLVPI ADALLKEAAA PGGPWLPLPA TATQLFIQGS ENSLLSSGR
001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR
Arabidopsis Description
ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.