Factsheet for Bra018614.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93552	Canola	plastid	79.34	79.04
Bra031632.1-P	Field mustard	plastid	68.63	71.26
AT1G08570.1	Thale cress	plastid	70.48	69.45
HORVU2Hr1G017310.1	Barley	cytosol	47.97	62.8
Os03t0326500-01	Rice	mitochondrion	22.88	56.36
PGSC0003DMT400060823	Potato	mitochondrion	46.86	55.22
TraesCS4D01G176100.1	Wheat	plastid	55.35	54.35
TraesCS4A01G130400.1	Wheat	plastid	55.35	54.35
TraesCS4B01G174100.1	Wheat	plastid	54.98	53.99
HORVU4Hr1G051400.3	Barley	plastid	54.61	53.62
GSMUA_Achr8P21480_001	Banana	plastid	52.03	53.01
KRG94786	Soybean	plastid	57.93	52.86
KRH06734	Soybean	plastid	58.3	52.84
GSMUA_Achr6P32280_001	Banana	plastid	52.77	52.57
EER92835	Sorghum	plastid	51.29	52.26
Os07t0684100-01	Rice	plastid	52.77	51.25
Zm00001d047555_P001	Maize	plastid	52.77	50.89
GSMUA_Achr9P04970_001	Banana	plastid	51.66	50.36
Solyc10g080730.1.1	Tomato	plastid	47.6	50.19
KXG39469	Sorghum	plastid	52.4	50.18
TraesCS2B01G118100.1	Wheat	plastid	50.18	49.82
PGSC0003DMT400048452	Potato	plastid	54.98	49.5
TraesCS2A01G100900.1	Wheat	plastid	49.82	49.45
Zm00001d028992_P001	Maize	plastid	51.29	48.94
TraesCS2D01G100500.1	Wheat	plastid	49.08	48.9
GSMUA_Achr5P07610_001	Banana	mitochondrion	34.32	48.69
KXG36973	Sorghum	plastid	50.18	48.57
VIT_08s0007g07620.t01	Wine grape	plastid	54.98	48.22
Solyc12g019740.1.1	Tomato	plastid	53.14	48.16
Zm00001d022518_P002	Maize	plastid	47.23	47.06
Bra021838.1-P	Field mustard	plastid	43.91	43.75
Bra012959.1-P	Field mustard	plastid	39.48	40.84
Bra026460.1-P	Field mustard	plastid	25.09	31.48
Bra011127.1-P	Field mustard	plastid	27.68	31.25
Bra024139.1-P	Field mustard	plastid	25.83	29.17

Protein Annotations

EnsemblPlants:Bra018614.1	EnsemblPlants:Bra018614.1-P	EnsemblPlantsGene:Bra018614	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF9	PFAM:PF00085	PFscan:PS51352	SEG:seg
SUPFAM:SSF52833	UniParc:UPI000253E79B	UniProt:M4DQ23	MapMan:10.5.7	:	:

Description

AT1G08570 (E=1e-109) ACHT4 | ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor

Coordinates

chrA06:+:2962870..2963974

Molecular Weight (calculated)

29684.3 Da

IEP (calculated)

8.579

GRAVY (calculated)

-0.305

Length

271 amino acids

Sequence
(BLAST)

001: MAEVISKTSL FFGGGACVNH HHHHVDDLSV SPVSFGFKKS FSSSLKQKPL RSDFSGKQIL ETFNRSFRSS SVTAQSTLRI GTAHKWWEKG SQENMREISS
101: AQDLVDSLAD AGDKLVVVDF FSPGCGGCKA LHPKMCQLAE QSPDVQFLQV NYEEHKSMCY SLGVHVLPFF RFYRGAQGRV CSFSCTNATI KKFRDALAKH
201: SPDRCSLGPT KGLEEKELVA LAANKELNFS YTPKVVPVEK EAAIPTANPA LPVPHPSMSG SEEKTLVSAG R

Best Arabidopsis Sequence Match ( AT1G08570.1 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPVS FGGFGLKKSF SCLKLKSQKP LRSVFYGKQI VFGDSQDESF RRSSAITAQT TLRIGTAQKW WEKGLKDNMR
101: EISSAQELVD SLTNAGDKLV VVDFFSPGCG GCKALHPKIC QFAEMNPDVQ FLQVNYEEHK SMCYSLGVHV LPFFRFYRGS QGRVCSFSCT NATIKKFRDA
201: LAKHGPDRCS LGPTKGLEEK ELVALAANKE LNFTYTPKPV PVEKEAATPD SNPSLPVPLP SMSSNDEKTL VSAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.