Factsheet for TraesCS2B01G118100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G100900.1	Wheat	plastid	95.6	95.6
TraesCS2D01G100500.1	Wheat	plastid	93.04	93.38
HORVU2Hr1G017310.1	Barley	cytosol	70.7	93.24
Os07t0684100-01	Rice	plastid	69.96	68.46
Zm00001d022518_P002	Maize	plastid	66.3	66.54
KXG36973	Sorghum	plastid	67.77	66.07
PGSC0003DMT400060823	Potato	mitochondrion	47.99	56.96
TraesCS4B01G174100.1	Wheat	plastid	57.14	56.52
GSMUA_Achr8P21480_001	Banana	plastid	53.11	54.51
CDY06319	Canola	plastid	50.92	53.26
Bra031632.1-P	Field mustard	plastid	50.92	53.26
GSMUA_Achr9P04970_001	Banana	plastid	52.75	51.8
GSMUA_Achr6P32280_001	Banana	plastid	50.92	51.1
GSMUA_Achr5P07610_001	Banana	mitochondrion	35.53	50.79
CDX93552	Canola	plastid	50.55	50.74
AT1G08570.1	Thale cress	plastid	50.92	50.55
Solyc10g080730.1.1	Tomato	plastid	47.25	50.19
CDY22676	Canola	plastid	49.45	50.19
Bra018614.1-P	Field mustard	plastid	49.82	50.18
CDX95049	Canola	plastid	48.35	49.25
KRG94786	Soybean	plastid	53.48	49.16
KRH06734	Soybean	plastid	53.48	48.83
VIT_08s0007g07620.t01	Wine grape	plastid	54.21	47.9
PGSC0003DMT400048452	Potato	plastid	49.45	44.85
Solyc12g019740.1.1	Tomato	plastid	49.08	44.82
Bra021838.1-P	Field mustard	plastid	42.86	43.01
AT2G33270.1	Thale cress	plastid	40.66	40.66
CDY66710	Canola	plastid	32.23	39.64
CDY37738	Canola	endoplasmic reticulum	41.76	39.45
TraesCS1B01G142600.2	Wheat	plastid	28.94	36.74

Protein Annotations

EnsemblPlants:TraesCS2B01G118100.1	EnsemblPlantsGene:TraesCS2B01G118100	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR43601	PANTHER:PTHR43601:SF2
PFAM:PF00085	PFscan:PS51352	SEG:seg	SUPFAM:SSF52833	TIGR:cd02947	MapMan:10.5.7

Description

No Description!

Coordinates

chr2B:-:82060181..82061417

Molecular Weight (calculated)

29054.9 Da

IEP (calculated)

8.287

GRAVY (calculated)

-0.102

Length

273 amino acids

Sequence
(BLAST)

001: MANALCGGSS NVAAPCGEFG PGAALAESLP MGAGYRAKSS FPAGRVALAD RPLPRSLQVA AAAGQMNGNL TIGKAMRWWE KVTHPNMREV ESAQDLADSL
101: LNAGDKLVVV DFFSPGCGGC RALHPKIAQF AERNPDVLFL QVNYEKHKSM CYSLHVHVLP FFRFYRGAQG RVSSFSCTNA TIKKFKDALA KHSPDRCSLG
201: PARGLEEAEL LALAANRDLE FTYNNEKPSL VPIAEAIQME AASIGGPWMP LPAAATQPLA LGSENGSLIP SGR

Best Arabidopsis Sequence Match ( AT1G08570.2 )
(BLAST)

001: MTEVISKTSL FLGACGNHHR VDDFSFSPIV FGDSQDESFR RSSAITAQTT LRIGTAQKWW EKGLKDNMRE ISSAQELVDS LTNAGDKLVV VDFFSPGCGG
101: CKALHPKICQ FAEMNPDVQF LQVNYEEHKS MCYSLGVHVL PFFRFYRGSQ GRVCSFSCTN ATIKKFRDAL AKHGPDRCSL GPTKGLEEKE LVALAANKEL
201: NFTYTPKPVP VEKEAATPDS NPSLPVPLPS MSSNDEKTLV SAGR

Arabidopsis Description

ACHT4Thioredoxin-like 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64654]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.