Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g02310.t01 | Wine grape | plastid | 56.48 | 58.94 |
| PGSC0003DMT400006408 | Potato | plastid | 48.15 | 53.33 |
| Solyc03g121480.2.1 | Tomato | plastid | 48.15 | 52.53 |
| HORVU1Hr1G028680.1 | Barley | plastid | 50.0 | 50.23 |
| TraesCS1A01G124400.2 | Wheat | plastid | 49.07 | 50.0 |
| TraesCS1D01G129500.2 | Wheat | plastid | 49.54 | 49.77 |
| TraesCS1B01G142600.2 | Wheat | plastid | 49.54 | 49.77 |
| Os05t0200100-01 | Rice | plastid | 49.54 | 49.54 |
| AT4G26160.1 | Thale cress | plastid | 49.07 | 47.96 |
| EES19197 | Sorghum | plastid | 48.61 | 46.88 |
| CDX90776 | Canola | plastid | 46.76 | 46.76 |
| CDX94364 | Canola | plastid | 46.76 | 46.54 |
| Zm00001d037748_P001 | Maize | plastid | 47.22 | 45.95 |
| Bra026460.1-P | Field mustard | plastid | 45.83 | 45.83 |
| CDX89357 | Canola | plastid | 44.44 | 44.44 |
| GSMUA_Achr7P13460_001 | Banana | mitochondrion | 51.39 | 39.78 |
| Zm00001d010000_P001 | Maize | plastid | 27.78 | 37.27 |
| VIT_17s0000g06370.t01 | Wine grape | cytosol, plastid | 33.33 | 27.59 |
| VIT_08s0007g07620.t01 | Wine grape | plastid | 34.72 | 24.27 |
Protein Annotations
| MapMan:10.5.7 | EntrezGene:100853908 | wikigene:100853908 | Gene3D:3.40.30.10 | ProteinID:CBI35967 | ProteinID:CBI35967.3 |
| UniProt:D7U021 | EMBL:FN596494 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 | EntrezGene:LOC100853908 |
| wikigene:LOC100853908 | PFAM:PF00085 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR43601 | PANTHER:PTHR43601:SF10 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0001BE464F | ArrayExpress:VIT_09s0002g02380 |
| EnsemblPlantsGene:VIT_09s0002g02380 | EnsemblPlants:VIT_09s0002g02380.t01 | RefSeq:XP_003632853 | RefSeq:XP_003632853.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr9:+:2164764..2168596
Molecular Weight (calculated)
24286.5 Da
IEP (calculated)
10.284
GRAVY (calculated)
-0.217
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPLRFSLN SSKISSFSFS PFSPSSLIFP KSGVPRPNQT PSSRISSLNV LGPLQFTRPK RLASFKVHAS IAETNQPKWW EKNAGPNMID IHSMQEFLSA
101: LSQAGDKLVI VEFYGTWCAS CRALFPKLCK TAQDYPNIIF LKVNFDENKS MCKSLNVKML PCFHFYRGSD GLLESFSCSL AKFQKIKDAI TKYDIGHSSN
201: GQPKGMMCSF RFKLKL
101: LSQAGDKLVI VEFYGTWCAS CRALFPKLCK TAQDYPNIIF LKVNFDENKS MCKSLNVKML PCFHFYRGSD GLLESFSCSL AKFQKIKDAI TKYDIGHSSN
201: GQPKGMMCSF RFKLKL
001: MSPTTTSLRS LSFSLYASSN STPISTPIEA RQLLSSCNRF YGLSSSSSSS SLTTSSLIGN LVFSSRNQSL SVKVQALAAE TEQPKWWERK AGPNMIDITS
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E
101: AEQFLNALKD AGDRLVIVDF YGTWCGSCRA MFPKLCKTAK EHPNILFLKV NFDENKSLCK SLNVKVLPYF HFYRGADGQV ESFSCSLAKF QKLREAIERH
201: NVGSISNISS SASEKVEDSS E
Arabidopsis Description
ACHT1Thioredoxin-like 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.