Factsheet for GSMUA_Achr5P23090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P20560_001
GSMUA_Achr7P05020_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	GSMUA_Achr4P20560_001	AT2G18876.1	21798944
AT5G38480.1	GSMUA_Achr7P05020_001	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	93.18	93.18
GSMUA_Achr7P10320_001	Banana	cytosol	92.42	92.42
GSMUA_Achr2P16070_001	Banana	cytosol	92.42	92.42
GSMUA_AchrUn_...	Banana	cytosol	91.67	92.37
GSMUA_Achr9P28460_001	Banana	cytosol	91.67	91.67
GSMUA_Achr6P05260_001	Banana	cytosol	90.15	90.15
GSMUA_Achr10P...	Banana	cytosol	88.64	89.31
GSMUA_Achr6P10320_001	Banana	cytosol	82.58	84.5
GSMUA_Achr10P...	Banana	cytosol	81.82	83.72
GSMUA_Achr10P...	Banana	cytosol	77.27	78.46
GSMUA_Achr7P19110_001	Banana	cytosol	80.3	54.36
GSMUA_Achr10P...	Banana	cytosol	82.58	53.17
GSMUA_Achr4P30650_001	Banana	plasma membrane	90.15	51.52
Solyc02g063070.2.1	Tomato	plastid	90.91	46.15
VIT_14s0006g03230.t01	Wine grape	cytosol	90.91	45.8
PGSC0003DMT400062153	Potato	cytosol	90.15	45.77
KRH01783	Soybean	nucleus	88.64	45.53
Solyc03g034180.2.1	Tomato	cytosol	88.64	45.35
AT3G02520.2	Thale cress	cytosol	90.15	44.91
Bra001049.1-P	Field mustard	cytosol	88.64	44.83
CDX91996	Canola	cytosol	88.64	44.83
CDX74252	Canola	cytosol	88.64	44.83
CDY51543	Canola	cytosol	87.88	44.44
Bra040592.1-P	Field mustard	cytosol	87.88	44.44
CDY28698	Canola	cytosol	87.12	44.06
CDX74521	Canola	cytosol	85.61	43.97
Bra028187.1-P	Field mustard	cytosol	85.61	43.97
CDY71290	Canola	cytosol	85.61	43.97
CDY01659	Canola	cytosol	85.61	43.97
AT5G38480.1	Thale cress	cytosol	84.85	43.92
CDX67405	Canola	cytosol	85.61	43.8
Bra028409.1-P	Field mustard	cytosol	85.61	43.8
AT5G16050.2	Thale cress	cytosol	86.36	42.54
GSMUA_Achr3P06740_001	Banana	cytosol	69.7	41.44
KRH46909	Soybean	cytosol	79.55	40.38
PGSC0003DMT400050389	Potato	cytosol	78.03	39.62
GSMUA_Achr9P06440_001	Banana	cytosol	75.76	37.59
GSMUA_AchrUn_...	Banana	cytosol	72.73	37.35
GSMUA_Achr7P13910_001	Banana	cytosol	74.24	37.26
GSMUA_Achr6P26860_001	Banana	cytosol	74.24	36.98
GSMUA_Achr2P19330_001	Banana	plasma membrane	74.24	36.98
GSMUA_Achr7P00550_001	Banana	cytosol	70.45	34.32
GSMUA_Achr2P22240_001	Banana	cytosol	62.12	31.91
GSMUA_Achr4P15130_001	Banana	cytosol	54.55	29.63
GSMUA_Achr8P27280_001	Banana	cytosol	73.48	28.28
GSMUA_Achr3P17880_001	Banana	cytosol	17.42	13.07

Protein Annotations

EnsemblPlants:GSMUA_Achr5P23090_001	EnsemblPlants:GSMUA_Achr5T23090_001	EnsemblPlantsGene:GSMUA_Achr5G23090_001	Gene3D:1.20.190.20	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain
InterPro:IPR036815	PANTHER:PTHR18860	PANTHER:PTHR18860:SF34	PFAM:PF00244	PRINTS:PR00305	ScanProsite:PS00797
SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI000294DA72	UniProt:M0T0Y4	MapMan:35.1	:

Description

14-3-3 protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G23090_001]

Coordinates

chr5:+:24932101..24936179

Molecular Weight (calculated)

14767.1 Da

IEP (calculated)

4.134

GRAVY (calculated)

-0.495

Length

132 amino acids

Sequence
(BLAST)

001: MKGDYHRYLA EFKTGNERKE AAESTLVAYN SAQDIALAEL APTHPIRLGL ALNFSVFYYE IVNSPDRACS LAKQAFDEAI SELDTLSEES YKDSTLIMQL
101: LRDNLTLWTS DINDDVGDEI KEAPKQESGE GQ

Best Arabidopsis Sequence Match ( AT3G02520.1 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.