Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028409.1-P | Field mustard | cytosol | 99.61 | 99.61 |
| CDY71290 | Canola | cytosol | 98.84 | 99.22 |
| CDX74521 | Canola | cytosol | 94.96 | 95.33 |
| CDY01659 | Canola | cytosol | 94.57 | 94.94 |
| AT5G38480.1 | Thale cress | cytosol | 93.8 | 94.9 |
| KRH01783 | Soybean | nucleus | 88.37 | 88.72 |
| CDY51543 | Canola | cytosol | 88.37 | 87.36 |
| CDY28698 | Canola | cytosol | 87.98 | 86.97 |
| CDX91996 | Canola | cytosol | 87.98 | 86.97 |
| Solyc03g034180.2.1 | Tomato | cytosol | 86.82 | 86.82 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 87.98 | 86.64 |
| CDX74252 | Canola | cytosol | 86.82 | 85.82 |
| GSMUA_Achr5P23090_001 | Banana | cytosol | 43.8 | 85.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.41 | 85.5 |
| PGSC0003DMT400062153 | Potato | cytosol | 86.05 | 85.38 |
| Solyc02g063070.2.1 | Tomato | plastid | 85.66 | 85.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.41 | 84.85 |
| KRH46909 | Soybean | cytosol | 84.5 | 83.85 |
| PGSC0003DMT400050389 | Potato | cytosol | 83.72 | 83.08 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 82.95 | 81.99 |
| TraesCS4D01G046400.2 | Wheat | golgi | 82.95 | 81.99 |
| TraesCS4B01G045500.2 | Wheat | cytosol | 82.95 | 81.99 |
| HORVU4Hr1G007370.1 | Barley | plasma membrane | 82.95 | 81.99 |
| Os03t0710800-01 | Rice | nucleus, plasma membrane | 82.56 | 81.92 |
| CDY14618 | Canola | cytosol | 82.56 | 81.92 |
| CDX68022 | Canola | cytosol | 81.78 | 81.15 |
| CDX79255 | Canola | cytosol | 81.78 | 81.15 |
| CDX88436 | Canola | cytosol | 81.78 | 81.15 |
| CDY12024 | Canola | cytosol | 81.01 | 80.08 |
| CDY28408 | Canola | cytosol | 81.01 | 79.47 |
| OQU83613 | Sorghum | cytosol | 81.01 | 78.57 |
| CDX73313 | Canola | cytosol | 80.62 | 78.49 |
| Zm00001d053090_P001 | Maize | plastid | 81.01 | 77.99 |
| Os11t0546900-01 | Rice | plasma membrane | 79.84 | 77.74 |
| CDY41483 | Canola | cytosol | 77.91 | 77.61 |
| CDX91676 | Canola | cytosol | 77.13 | 76.83 |
| TraesCS4D01G155900.1 | Wheat | plastid | 79.07 | 76.69 |
| CDY40098 | Canola | cytosol | 72.87 | 75.81 |
| CDX85759 | Canola | cytosol | 72.87 | 75.81 |
| TraesCS4A01G151000.2 | Wheat | cytosol | 79.07 | 75.56 |
| CDX81287 | Canola | cytosol | 72.87 | 75.5 |
| CDY54716 | Canola | cytosol | 72.87 | 75.5 |
| CDY14562 | Canola | cytosol | 72.48 | 75.4 |
| CDY46646 | Canola | cytosol | 75.97 | 75.38 |
| Zm00001d007446_P003 | Maize | cytosol | 80.62 | 75.36 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 79.46 | 75.09 |
| CDY00447 | Canola | cytosol | 75.58 | 75.0 |
| CDY08794 | Canola | cytosol | 72.09 | 75.0 |
| CDX81179 | Canola | cytosol | 70.16 | 72.4 |
| CDX78381 | Canola | cytosol | 70.16 | 72.4 |
| CDX97016 | Canola | cytosol | 63.18 | 71.49 |
| CDX87455 | Canola | cytosol | 81.01 | 69.9 |
| Zm00001d048554_P001 | Maize | cytosol | 52.71 | 69.04 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 79.84 | 68.67 |
| CDY69181 | Canola | cytosol | 66.67 | 67.98 |
| CDY38227 | Canola | cytosol | 66.28 | 67.59 |
| Zm00001d021885_P001 | Maize | mitochondrion | 41.86 | 65.45 |
| CDY16161 | Canola | cytosol | 68.22 | 65.43 |
| CDX85023 | Canola | cytosol | 68.22 | 65.19 |
| Zm00001d033357_P001 | Maize | cytosol | 52.71 | 65.07 |
| Zm00001d017434_P001 | Maize | cytosol | 51.94 | 64.11 |
| Zm00001d007968_P001 | Maize | cytosol | 51.94 | 64.11 |
| CDY40251 | Canola | cytosol | 60.08 | 63.27 |
| CDY61201 | Canola | cytosol | 66.28 | 62.87 |
| CDY42826 | Canola | cytosol | 65.5 | 62.36 |
| CDY48771 | Canola | cytosol | 41.86 | 59.34 |
| CDY20560 | Canola | cytosol | 60.08 | 58.05 |
| CDY61631 | Canola | cytosol | 67.83 | 53.35 |
| CDY24128 | Canola | cytosol | 67.44 | 53.05 |
| CDY56386 | Canola | mitochondrion | 39.53 | 51.78 |
| CDY52206 | Canola | mitochondrion | 39.53 | 51.78 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 34.11 | 51.46 |
| CDX91673 | Canola | cytosol | 52.71 | 50.56 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 57.36 | 49.01 |
| CDX87464 | Canola | cytosol | 38.37 | 46.7 |
| CDX88428 | Canola | cytosol | 43.02 | 46.06 |
| CDX97014 | Canola | cytosol, plastid | 18.99 | 44.55 |
| CDY03135 | Canola | cytosol | 61.24 | 40.1 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 57.75 | 36.61 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078BS21 | unigene:Bna.565 | EnsemblPlants:CDX67405 | ProteinID:CDX67405 | ProteinID:CDX67405.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00098490001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF36 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI0004EE342A | : | : |
Description
BnaA07g14450D
Coordinates
chrLK031787:+:36573..38353
Molecular Weight (calculated)
28966.0 Da
IEP (calculated)
4.445
GRAVY (calculated)
-0.455
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSREENV YMAKLAEQAE RYEEMVEFME KVAKSVDNEE LTVEERNLLS VAYKNVIGAR RASWRIISSI EQKEESKGNE DHVAIIKDYR GKIEAELSKI
101: CDGILNVLEA HLIPSASPAE SKVFYLKMKG DYHRYLAEFK AGNERKDAAE STLVAYKSAQ DIATAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDEAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMT DEAGDEIKET SKPEGAAE
101: CDGILNVLEA HLIPSASPAE SKVFYLKMKG DYHRYLAEFK AGNERKDAAE STLVAYKSAQ DIATAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDEAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMT DEAGDEIKET SKPEGAAE
001: MSTREENVYM AKLAEQAERY EEMVEFMEKV AKTVDVEELS VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEDH VAIIKDYRGK IESELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
Arabidopsis Description
GRF3RCI1 [Source:UniProtKB/TrEMBL;Acc:A0A178UA42]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.